RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 PHLDB3Q6NSJ2 640 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
NUMB-212ENST00000554546 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 SNX27Q96L92 541 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 VPS16Q9H269 839 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
NUMB-212ENST00000554546 GLI2P10070 1586 aa12.33□□□□□ -0.44
NUMB-212ENST00000554546 A6NJR5 290 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 COBLO75128 1261 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 WFS1O76024 890 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 GSTT2P0CG29 244 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 GSTT2BP0CG30 244 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 BNIP1Q12981 228 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 KRT23Q9C075 422 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 ETNK1Q9HBU6 452 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 GDF3Q9NR23 364 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 A0A0D9SFI3 127 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 IFNAR2P48551 515 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUMB-212ENST00000554546 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 SREK1Q8WXA9 508 aaKnown RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 RSPH1Q8WYR4 309 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 ZPR1O75312 459 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 CHN1P15882 459 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 HALP42357 657 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 KRT83P78385 493 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 USH1GQ495M9 461 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 C6orf183Q5T699 404 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 PEX5LQ8IYB4 626 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 DYDC2Q96IM9 177 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
NUMB-212ENST00000554546 MIS12Q9H081 205 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 HPSEQ9Y251 543 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 TSC22D4Q9Y3Q8 395 aa12.32□□□□□ -0.44
NUMB-212ENST00000554546 DNA2P51530 1060 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 RASSF7Q02833 373 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 CCDC6Q16204 474 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 KLC3Q6P597 504 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 SPATA24Q86W54 205 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 ATP6V0A1Q93050 837 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 MS4A14Q96JA4 679 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 ITGB1BP2Q9UKP3 347 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 PRELID1Q9Y255 219 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 USP20Q9Y2K6 914 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 TIMM22Q9Y584 194 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 PLCH2O75038 1416 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 GM2AP17900 193 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 FLT3P36888 993 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 GPSM2P81274 684 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 ITIH3Q06033 890 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 PBKQ96KB5 322 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 PNMA2Q9UL42 364 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 SCG2P13521 617 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 HSPA9P38646 679 aaKnown RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 GEMIN4P57678 1058 aaKnown RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 LIN52Q52LA3 116 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 LMBRD2Q68DH5 695 aaPredicted RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 CAPN12Q6ZSI9 719 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 RAB3IPQ96QF0 476 aaPredicted RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
NUMB-212ENST00000554546 LRRC7Q96NW7 1537 aa12.31□□□□□ -0.44
NUMB-212ENST00000554546 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 RTP1P59025 263 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 DDX12PQ92771 950 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 CENPKQ9BS16 269 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 H0YGN5 161 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 TIMM44O43615 452 aa12.3□□□□□ -0.44
NUMB-212ENST00000554546 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms