RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 THAP9Q9H5L6 903 aa18.68■□□□□ 0.58
PPP4R3A-202ENST00000554390 EPB41L5Q9HCM4 733 aa18.68■□□□□ 0.58
PPP4R3A-202ENST00000554390 MAD2L2Q9UI95 211 aa18.68■□□□□ 0.58
PPP4R3A-202ENST00000554390 PCDHA13Q9Y5I0 950 aa18.68■□□□□ 0.58
PPP4R3A-202ENST00000554390 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 MRPL12P52815 198 aaKnown RBP18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 SPRED3Q2MJR0 410 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 TRIM9Q9C026 710 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 GOLGA6L7A0A1B0GV03 622 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 AKR1B10O60218 316 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 HPDP32754 393 aaPredicted RBP18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 RASSF7Q02833 373 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 ITGB3BPQ13352 177 aaPredicted RBP18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 FAM182BQ5T319 152 aa18.67■□□□□ 0.58
PPP4R3A-202ENST00000554390 NEBLO76041 1014 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 GUCY2DQ02846 1103 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 ACTR5Q9H9F9 607 aaPredicted RBP18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 GDF3Q9NR23 364 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 FRMPD2Q68DX3 1309 aaPredicted RBP18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 DNM1LO00429 736 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 HIBADHP31937 336 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 PPP2R5BQ15173 497 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 E2F5Q15329 346 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 LRCH2Q5VUJ6 765 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 CD302Q8IX05 232 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 OSBPL7Q9BZF2 842 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 HAUS2Q9NVX0 235 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 KBTBD4Q9NVX7 518 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 LRRC53A6NM62 1247 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 HEXIM1O94992 359 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 PAK2Q13177 524 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 ALS2CR12Q96Q35 445 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 TPX2Q9ULW0 747 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 UTRNP46939 3433 aa18.66■□□□□ 0.58
PPP4R3A-202ENST00000554390 PLCH1Q4KWH8 1693 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 FRMD3A2A2Y4 597 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 KLRF2D3W0D1 207 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 RHOBTB3O94955 611 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 KIF5BP33176 963 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 GLE1Q53GS7 698 aaKnown RBP18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 HMGB1P1B2RPK0 211 aaPredicted RBP18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 CRYMQ14894 314 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 MAATS1Q7Z4T9 603 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 COA7Q96BR5 231 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 SGSM3Q96HU1 749 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 TMEM47Q9BQJ4 181 aa18.65■□□□□ 0.58
PPP4R3A-202ENST00000554390 STXBP3O00186 592 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 PPP1R12AO14974 1030 aaPredicted RBP18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 FTCDO95954 541 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 EZRP15311 586 aaKnown RBP18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 KIF11P52732 1056 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 CLNS1AP54105 237 aaKnown RBP18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 CDK17Q00537 523 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 PPP4R3AQ6IN85 833 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 PYM1Q9BRP8 204 aaKnown RBP18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 FLT1P17948 1338 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 UBE4AQ14139 1066 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 KIRREL3Q8IZU9 778 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 TBCKQ8TEA7 893 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
PPP4R3A-202ENST00000554390 CCNE1P24864 410 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 CALML3P27482 149 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 SLC1A4P43007 532 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 TRAPPC10P48553 1259 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 CCDC50Q8IVM0 306 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 MREGQ8N565 214 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 PIGSQ96S52 555 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 MMTAG2Q9BU76 263 aaKnown RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 FGFBP2Q9BYJ0 223 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 SLC24A3Q9HC58 644 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 MYH14Q7Z406 1995 aaKnown RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 RAD21O60216 631 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 TDP2O95551 362 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 SF3A3Q12874 501 aaKnown RBP eCLIP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 PARP10Q53GL7 1025 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 PLAAQ9Y263 795 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 GMNCA6NCL1 334 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 MYMKA6NI61 221 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 SRRM3A6NNA2 597 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 ORC4O43929 436 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 QPCTQ16769 361 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 CFAP221Q4G0U5 840 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 ANKRD20A8PQ5CZ79 823 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms