RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 STK11IPQ8N1F8 1099 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 NAT16Q8N8M0 369 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 BCL7CQ8WUZ0 217 aaPredicted RBP6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 SYTL4Q96C24 671 aaPredicted RBP6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 FEZ1Q99689 392 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 CARS2Q9HA77 564 aaKnown RBP6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 PLEKHG1Q9ULL1 1385 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 NKTRP30414 1462 aaKnown RBP6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 SPATA31E1Q6ZUB1 1445 aa6.76□□□□□ -1.33
MTHFD1-206ENST00000554353 MSH6P52701 1360 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 SCG5P05408 212 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 PLS3P13797 630 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 GYS2P54840 703 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 CYP4F3Q08477 520 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 EEF1DP3Q658K8 133 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 ZNF574Q6ZN55 896 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 SPRED2Q7Z698 418 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 SYNPOQ8N3V7 929 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 COPS5Q92905 334 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 WASHC2AQ641Q2 1341 aa6.75□□□□□ -1.33
MTHFD1-206ENST00000554353 NUP155O75694 1391 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 DNAJC25-GNG10A0A024R161 153 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 MEFVO15553 781 aaPredicted RBP6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ANP32CO43423 234 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 CD8BP10966 210 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ENDOUP21128 410 aaKnown RBP6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ZP2Q05996 745 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ZMYM1Q5SVZ6 1142 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 SLC35F1Q5T1Q4 408 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 DENND5AQ6IQ26 1287 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 KREMEN2Q8NCW0 462 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 FRS2Q8WU20 508 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 NDOR1Q9UHB4 597 aa6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 ANGEL1Q9UNK9 670 aaKnown RBP6.74□□□□□ -1.33
MTHFD1-206ENST00000554353 SPHKAPQ2M3C7 1700 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 EP400Q96L91 3159 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 PLD2O14939 933 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 FGF10O15520 208 aaPredicted RBP6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 LAPTM5Q13571 262 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 NTRK3Q16288 839 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 FLCNQ8NFG4 579 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 C1orf159Q96HA4 380 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 CCDC39Q9UFE4 941 aa6.73□□□□□ -1.33
MTHFD1-206ENST00000554353 CCDC7Q96M83 1385 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 NPHP3-ACAD11A0A0J9YXS1 232 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 C6orf222P0C671 652 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 ATF3P18847 181 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 PAMP19021 973 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 CD97P48960 835 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 PABPC4Q13310 644 aaKnown RBP eCLIP6.72□□□□□ -1.333e-23■■■■■ 42.9
MTHFD1-206ENST00000554353 TMED8Q6PL24 325 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 VSIG10LQ86VR7 867 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 DTX1Q86Y01 620 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 CPNE8Q86YQ8 564 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 CLUHP3Q96NS8 147 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 MRPL4Q9BYD3 311 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 PRDM7Q9NQW5 492 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 ERVK13-1Q9NX77 482 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 LMCD1Q9NZU5 365 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 TMEFF2Q9UIK5 374 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 ADAMTS13Q76LX8 1427 aa6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 COL16A1Q07092 1604 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-206ENST00000554353 KIF1BO60333 1816 aa6.71□□□□□ -1.33
MTHFD1-206ENST00000554353 JCADQ9P266 1359 aa6.71□□□□□ -1.33
MTHFD1-206ENST00000554353 SETD1AO15047 1707 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 DIP2AQ14689 1571 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 NCOA3Q9Y6Q9 1424 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 TBC1D8O95759 1140 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PRNPP04156 253 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 GABREP78334 506 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 KCNT2Q6UVM3 1135 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 DCAF4Q8WV16 495 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 DIO2Q92813 273 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PTPRN2Q92932 1015 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 FCRL2Q96LA5 508 aaPredicted RBP6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PHF20Q9BVI0 1012 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 ADAMTS10Q9H324 1103 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 MYH16Q9H6N6 1097 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 C19orf44Q9H6X5 657 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 SLC52A2Q9HAB3 445 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PRDM16Q9HAZ2 1276 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PCMTD2Q9NV79 361 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 TRPM2O94759 1503 aa6.71□□□□□ -1.34
MTHFD1-206ENST00000554353 PIK3R4Q99570 1358 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms