RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 KRT23Q9C075 422 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 COL20A1Q9P218 1284 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 CTNNA3Q9UI47 895 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 MTUS1Q9ULD2 1270 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 EIF3JO75822 258 aaKnown RBP10.26□□□□□ -0.77
TDP1-208ENST00000553989 PPP1R37O75864 691 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 PARNO95453 639 aaKnown RBP10.26□□□□□ -0.77
TDP1-208ENST00000553989 NR3C2P08235 984 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 PSEN2P49810 448 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 GRB10Q13322 594 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 MFSD10Q14728 455 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 KIAA0753Q2KHM9 967 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
TDP1-208ENST00000553989 SESTD1Q86VW0 696 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 CHD1LQ86WJ1 897 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 ENAHQ8N8S7 591 aaPredicted RBP10.26□□□□□ -0.77
TDP1-208ENST00000553989 GDPD5Q8WTR4 605 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 KAT2BQ92831 832 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 AMNQ9BXJ7 453 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 MAF1Q9H063 256 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 CNNM2Q9H8M5 875 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 PXMP2Q9NR77 195 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 GTF2IRD1Q9UHL9 959 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 RAPGEFL1Q9UHV5 662 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 COG5Q9UP83 839 aa10.26□□□□□ -0.77
TDP1-208ENST00000553989 LCHNA4D1U4 455 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 CKBP12277 381 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 BMP1P13497 986 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 DEFB103AP81534 67 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 HOMER1Q86YM7 354 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 PPTC7Q8NI37 304 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
TDP1-208ENST00000553989 HLA-CQ95604 372 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 DSCC1Q9BVC3 393 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 C1QTNF1Q9BXJ1 281 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
TDP1-208ENST00000553989 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
TDP1-208ENST00000553989 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
TDP1-208ENST00000553989 PRRC2BQ5JSZ5 2229 aaKnown RBP10.24□□□□□ -0.77
TDP1-208ENST00000553989 ABHD14A-ACY1A0A1B0GW23 586 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 NBNO60934 754 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 EFCAB14O75071 495 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 GGPS1O95749 300 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 F2P00734 622 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
TDP1-208ENST00000553989 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
TDP1-208ENST00000553989 TRDNQ13061 729 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 PTK7Q13308 1070 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 IKBKEQ14164 716 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 BECN1Q14457 450 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 SMC5Q8IY18 1101 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 STAG2Q8N3U4 1231 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
TDP1-208ENST00000553989 CTAGE1Q96RT6 745 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 MLXIPQ9HAP2 919 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 PCDHA1Q9Y5I3 950 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
TDP1-208ENST00000553989 MYH6P13533 1939 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 TRIP12Q14669 1992 aaPredicted RBP10.23□□□□□ -0.77
TDP1-208ENST00000553989 COL4A4P53420 1690 aaPredicted RBP10.23□□□□□ -0.77
TDP1-208ENST00000553989 ERICH2A1L162 156 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
TDP1-208ENST00000553989 ZBTB5O15062 677 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 GJB5O95377 273 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 CCND2P30279 289 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 THPOP40225 353 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 HSD17B4P51659 736 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 ZNF200P98182 395 aaPredicted RBP10.23□□□□□ -0.77
TDP1-208ENST00000553989 NUCB1Q02818 461 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 RBL2Q08999 1139 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 PGM5Q15124 567 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 E2F4Q16254 413 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 ZNF618Q5T7W0 954 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 KCNV1Q6PIU1 500 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 FCHSD1Q86WN1 690 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 MYOCDQ8IZQ8 938 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 TGS1Q96RS0 853 aaKnown RBP10.23□□□□□ -0.77
TDP1-208ENST00000553989 RAD9AQ99638 391 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 OSBPL3Q9H4L5 887 aa10.23□□□□□ -0.77
TDP1-208ENST00000553989 TET1Q8NFU7 2136 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 C17orf102A2RUQ5 167 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 LPXNO60711 386 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 LGR5O75473 907 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms