RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 AMHP03971 560 aa20.64■□□□□ 0.89
SYNE2-211ENST00000553801 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
SYNE2-211ENST00000553801 TCTN1Q2MV58 587 aa20.64■□□□□ 0.89
SYNE2-211ENST00000553801 FAM117BQ6P1L5 589 aa20.64■□□□□ 0.89
SYNE2-211ENST00000553801 CTNNA3Q9UI47 895 aa20.64■□□□□ 0.89
SYNE2-211ENST00000553801 B4E1Z4 1266 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 PI4K2BG5E9Z4 385 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 MYCLP12524 364 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-211ENST00000553801 HOXD8P13378 290 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-211ENST00000553801 HSD17B4P51659 736 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 MYSM1Q5VVJ2 828 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 TRAF7Q6Q0C0 670 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 SAMD3Q8N6K7 520 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 ENAHQ8N8S7 591 aaPredicted RBP20.63■□□□□ 0.89
SYNE2-211ENST00000553801 FBXO22Q8NEZ5 403 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 SPATA33Q96N06 139 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 ZSWIM5Q9P217 1185 aa20.63■□□□□ 0.89
SYNE2-211ENST00000553801 SIP14410 1827 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 RSPH10B2B2RC85 870 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 RSPH10BP0C881 870 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 TGFB3P10600 412 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 ZNF200P98182 395 aaPredicted RBP20.62■□□□□ 0.89
SYNE2-211ENST00000553801 GHRHRQ02643 423 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 LEXMQ3ZCV2 418 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 CELF3Q5SZQ8 465 aaKnown RBP20.62■□□□□ 0.89
SYNE2-211ENST00000553801 PDCD2LQ9BRP1 358 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 KRT23Q9C075 422 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
SYNE2-211ENST00000553801 THPOP40225 353 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
SYNE2-211ENST00000553801 TRAF1Q13077 416 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 MBTPS1Q14703 1052 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 PTPROQ16827 1216 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 IMMTQ16891 758 aaKnown RBP20.61■□□□□ 0.89
SYNE2-211ENST00000553801 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 MYOCDQ8IZQ8 938 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 DBF4BQ8NFT6 615 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 WNT8BQ93098 351 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 SAMD11Q96NU1 681 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 UBAC1Q9BSL1 405 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 CNNM2Q9H8M5 875 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 DIAPH3Q9NSV4 1193 aa20.61■□□□□ 0.89
SYNE2-211ENST00000553801 HIP1O00291 1037 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 GGPS1O95749 300 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 KCNA5P22460 613 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 PUS10Q3MIT2 529 aaKnown RBP20.6■□□□□ 0.89
SYNE2-211ENST00000553801 HSDL1Q3SXM5 330 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 CWC27Q6UX04 472 aaKnown RBP20.6■□□□□ 0.89
SYNE2-211ENST00000553801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.6■□□□□ 0.89
SYNE2-211ENST00000553801 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 VSIG10LQ86VR7 867 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 FAM178BQ8IXR5 827 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 GJD3Q8N144 294 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 KHSRPQ92945 711 aaKnown RBP eCLIP20.6■□□□□ 0.89
SYNE2-211ENST00000553801 DSCC1Q9BVC3 393 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 MLXIPQ9HAP2 919 aa20.6■□□□□ 0.89
SYNE2-211ENST00000553801 C17orf102A2RUQ5 167 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 ZBTB5O15062 677 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 RGS20O76081 388 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 HTRA4P83105 476 aaPredicted RBP20.59■□□□□ 0.89
SYNE2-211ENST00000553801 IFIT1BQ5T764 474 aaKnown RBP20.59■□□□□ 0.89
SYNE2-211ENST00000553801 ATP6V0A1Q93050 837 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 MRPL38Q96DV4 380 aaKnown RBP20.59■□□□□ 0.89
SYNE2-211ENST00000553801 C17orf80Q9BSJ5 609 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 CD320Q9NPF0 282 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 C11orf16Q9NQ32 467 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 PCDHA1Q9Y5I3 950 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 MICAL3Q7RTP6 2002 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 LAMA4Q16363 1823 aa20.59■□□□□ 0.89
SYNE2-211ENST00000553801 FAM86C2PA6NEL3 165 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 KLRF2D3W0D1 207 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 OPLAHO14841 1288 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 CCND2P30279 289 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 PGM5Q15124 567 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 PLEKHG4Q58EX7 1191 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 STAG2Q8N3U4 1231 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.58■□□□□ 0.89
SYNE2-211ENST00000553801 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.89
SYNE2-211ENST00000553801 SEPT8Q92599 483 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 C16orf70Q9BSU1 422 aa20.58■□□□□ 0.89
SYNE2-211ENST00000553801 H3BRB1 525 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 SORBS3O60504 671 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 CAND2O75155 1236 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 UBA1P22314 1058 aaKnown RBP20.57■□□□□ 0.88
SYNE2-211ENST00000553801 SSTR3P32745 418 aaPredicted RBP20.57■□□□□ 0.88
SYNE2-211ENST00000553801 MKRN4PQ13434 485 aaPredicted RBP20.57■□□□□ 0.88
SYNE2-211ENST00000553801 HIC1Q14526 733 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 TIGD5Q53EQ6 642 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 PTCRAQ6ISU1 281 aaPredicted RBP20.57■□□□□ 0.88
SYNE2-211ENST00000553801 MTMR8Q96EF0 704 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 YME1L1Q96TA2 773 aa20.57■□□□□ 0.88
SYNE2-211ENST00000553801 TUT1Q9H6E5 874 aaKnown RBP20.57■□□□□ 0.88
SYNE2-211ENST00000553801 PRR33A8MZF0 331 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 GCOM1H8Y6P7 765 aaPredicted RBP20.56■□□□□ 0.88
SYNE2-211ENST00000553801 POLR2MP0CAP2 368 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 GNAT1P11488 350 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 ALADP13716 330 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
SYNE2-211ENST00000553801 SP2Q02086 613 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 EPC2Q52LR7 807 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms