RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 NTRK3Q16288 839 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 ALDH8A1Q9H2A2 487 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 LTBP2Q14767 1821 aa11.71□□□□□ -0.53
HNRNPC-208ENST00000553753 SCN10AQ9Y5Y9 1956 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 MYH7BA7E2Y1 1941 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 FIBPO43427 364 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 PPFIA4O75335 1185 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 SCG2P13521 617 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 ADCY7P51828 1080 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 HSDL1Q3SXM5 330 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 PHKBQ93100 1093 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 SPATA33Q96N06 139 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 GLT8D2Q9H1C3 349 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 TRPV6Q9H1D0 765 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 MLXIPQ9HAP2 919 aa11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-208ENST00000553753 SORBS3O60504 671 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 SUPT20HL2P0C7V6 817 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 IFNAR1P17181 557 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 NEDD9Q14511 834 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 PKN1Q16512 942 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 FAM47CQ5HY64 1035 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 NLRX1Q86UT6 975 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 EHMT1Q9H9B1 1298 aa11.7□□□□□ -0.54
HNRNPC-208ENST00000553753 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SEC24BO95487 1268 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 ITGB5P18084 799 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 FPGSQ05932 587 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CCDC12Q8WUD4 166 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 KAT2BQ92831 832 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SENP7Q9BQF6 1050 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 HIPK3Q9H422 1215 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CDH23Q9H251 3354 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CPLX1O14810 134 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SLC34A2O95436 690 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 SHHQ15465 462 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 TMEM199Q8N511 208 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 PPP1R13LQ8WUF5 828 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 IL17RAQ96F46 866 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 KATNAL1Q9BW62 490 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
HNRNPC-208ENST00000553753 ESYT2A0FGR8 921 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 SOX1O00570 391 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 MAFGO15525 162 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 F2P00734 622 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 GNA11P29992 359 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 CYP2C18P33260 490 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 EPHB4P54760 987 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 STK3Q13188 491 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 MTMR1Q13613 665 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 C9orf50Q5SZB4 431 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 PGBD1Q96JS3 809 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 C6orf50Q9HD87 102 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 UBIAD1Q9Y5Z9 338 aa11.68□□□□□ -0.54
HNRNPC-208ENST00000553753 ATP9AO75110 1047 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 CYP2C9P11712 490 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 CSF2RAP15509 400 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 SSRP1Q08945 709 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 ANKRD1Q15327 319 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 KIAA0753Q2KHM9 967 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 SESTD1Q86VW0 696 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 C7orf31Q8N865 590 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 NOC4LQ9BVI4 516 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms