RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BTG4Q9NY30 223 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 PFDN2Q9UHV9 154 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 FBXL7Q9UJT9 491 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 CDK11AQ9UQ88 783 aaPredicted RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 FAN1Q9Y2M0 1017 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 HCFC2Q9Y5Z7 792 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 FAM47E-STBD1D6RA91 191 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 APPP05067 770 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 C6orf222P0C671 652 aaPredicted RBP5.06□□□□□ -1.6
VRK1-202ENST00000553683 GRK2P25098 689 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 GRK3P35626 688 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 AFF3P51826 1226 aaKnown RBP5.06□□□□□ -1.6
VRK1-202ENST00000553683 SPIRE1Q08AE8 756 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 C2orf27AQ580R0 203 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 TRIM61Q5EBN2 209 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 MILR1Q7Z6M3 343 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 LINC00482Q8N8I6 264 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 LINC01356Q8N9X3 169 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 PMFBP1Q8TBY8 1022 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 PANK1Q8TE04 598 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 DNAJC2Q99543 621 aaKnown RBP5.06□□□□□ -1.6
VRK1-202ENST00000553683 IRF2BPLQ9H1B7 796 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 PALD1Q9ULE6 856 aa5.06□□□□□ -1.6
VRK1-202ENST00000553683 MRPS23Q9Y3D9 190 aaKnown RBP5.06□□□□□ -1.6
VRK1-202ENST00000553683 SH3D21A4FU49 640 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 GSTA4O15217 222 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 MSCO60682 206 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 CYP2C8P10632 490 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 PAK1Q13153 545 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 FAM209AQ5JX71 171 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 FOXB2Q5VYV0 432 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 SPOCD1Q6ZMY3 1216 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 LCNL1Q6ZST4 164 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 SAPCD2Q86UD0 394 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 MRFAP1L1Q96HT8 127 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 EXOC2Q96KP1 924 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 PWWP2AQ96N64 755 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 MRPL4Q9BYD3 311 aaKnown RBP5.05□□□□□ -1.6
VRK1-202ENST00000553683 PCDHB4Q9Y5E5 795 aa5.05□□□□□ -1.6
VRK1-202ENST00000553683 TCRBV5S2A0A599 114 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 ARVCFO00192 962 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 SOD2P04179 222 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 NCKAP1LP55160 1127 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 FBLN7Q53RD9 439 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 TTLL6Q8N841 843 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 GSTCDQ8NEC7 633 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
VRK1-202ENST00000553683 FNIP1Q8TF40 1166 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 TOE1Q96GM8 510 aaKnown RBP5.04□□□□□ -1.6
VRK1-202ENST00000553683 RXFP1Q9HBX9 757 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 ASH2LQ9UBL3 628 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 SIT1Q9Y3P8 196 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 PMF1-BGLAPU3KQ54 211 aa5.04□□□□□ -1.6
VRK1-202ENST00000553683 NPTXRO95502 500 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 EPHA5P54756 1037 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 NKX3-2P78367 333 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 SP8Q8IXZ3 490 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 SMARCC2Q8TAQ2 1214 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 LNPKQ9C0E8 428 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 LUC7LQ9NQ29 371 aaKnown RBP5.03□□□□□ -1.6
VRK1-202ENST00000553683 DTLQ9NZJ0 730 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 MYOTQ9UBF9 498 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 ASXL2Q76L83 1435 aa5.03□□□□□ -1.6
VRK1-202ENST00000553683 CYP7B1O75881 506 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 C8BP07358 591 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 GNAT1P11488 350 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 LIMS1P48059 325 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 VWA3BQ502W6 1294 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 C16orf59Q7L2K0 433 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
VRK1-202ENST00000553683 NLGN4XQ8N0W4 816 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 LILRB2Q8N423 598 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 MARCH10Q8NA82 808 aaPredicted RBP5.02□□□□□ -1.61
VRK1-202ENST00000553683 KYQ8NBH2 561 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 WRNIP1Q96S55 665 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 YIPF4Q9BSR8 244 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 ZSWIM4Q9H7M6 989 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
VRK1-202ENST00000553683 BLACEA4D250 179 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 FFAR3O14843 346 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 PLD2O14939 933 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 PLA2G1BP04054 148 aaKnown RBP5.01□□□□□ -1.61
VRK1-202ENST00000553683 MC3RP41968 323 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 GUCY1A3Q02108 690 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
VRK1-202ENST00000553683 GPR19Q15760 415 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 CR1LQ2VPA4 569 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 CCDC144BQ3MJ40 725 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 FNDC3BQ53EP0 1204 aaKnown RBP5.01□□□□□ -1.61
VRK1-202ENST00000553683 FAM47CQ5HY64 1035 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 TTLL7Q6ZT98 887 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 PCDH19Q8TAB3 1148 aa5.01□□□□□ -1.61
VRK1-202ENST00000553683 PIP4K2CQ8TBX8 421 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms