RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 LIFRP42702 1097 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 PSEN2P49810 448 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 MYSM1Q5VVJ2 828 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 DEFB128Q7Z7B8 93 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 C7orf31Q8N865 590 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 CUL5Q93034 780 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 SLC28A3Q9HAS3 691 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 GTF2IRD1Q9UHL9 959 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 GBF1Q92538 1859 aa17.47■□□□□ 0.39
SDR39U1-205ENST00000553546 GGPS1O95749 300 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 ATP2A2P16615 1042 aaKnown RBP17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 UBA1P22314 1058 aaKnown RBP17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 RBL2Q08999 1139 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 MFSD10Q14728 455 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 GDF6Q6KF10 455 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 SPATA33Q96N06 139 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
SDR39U1-205ENST00000553546 HAS3O00219 553 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 ZNF286BP0CG31 522 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 KIAA0753Q2KHM9 967 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 INPP4AQ96PE3 977 aaPredicted RBP17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 FTOQ9C0B1 505 aaKnown RBP eCLIP17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 MLXIPQ9HAP2 919 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
SDR39U1-205ENST00000553546 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 PIK3CDO00329 1044 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 SELPP16109 830 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 ICAM3P32942 547 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 HSDL1Q3SXM5 330 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 PHOSPHO2Q8TCD6 241 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 HDAC6Q9UBN7 1215 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
SDR39U1-205ENST00000553546 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 NOP56O00567 594 aaKnown RBP17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 FIBPO43427 364 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 PTK7Q13308 1070 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 NEDD9Q14511 834 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 PCNX4Q63HM2 1172 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 SGMS1Q86VZ5 419 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 FAM122AQ96E09 287 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 CTAGE1Q96RT6 745 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 PRDM12Q9H4Q4 367 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 REV3LO60673 3130 aa17.43■□□□□ 0.38
SDR39U1-205ENST00000553546 NCOR1O75376 2440 aa17.42■□□□□ 0.38
SDR39U1-205ENST00000553546 MRPS9P82933 396 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-205ENST00000553546 SP2Q02086 613 aa17.42■□□□□ 0.38
SDR39U1-205ENST00000553546 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-205ENST00000553546 SPATA31C2B4DYI2 1134 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 KIF28PB7ZC32 967 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 MEIS2O14770 477 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 SORBS3O60504 671 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 CDC45O75419 566 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 CKBP12277 381 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 RXRAP19793 462 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 KCNJ6P48051 423 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 USP17L6PQ6QN14 398 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 METTL7BQ6UX53 244 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 TMTC3Q6ZXV5 915 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 NLRX1Q86UT6 975 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 GPKOWQ92917 476 aaPredicted RBP eCLIP17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 C16orf70Q9BSU1 422 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 USP26Q9BXU7 913 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 TET1Q8NFU7 2136 aa17.41■□□□□ 0.38
SDR39U1-205ENST00000553546 BDP1A6H8Y1 2624 aa17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 H3BRB1 525 aa17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 KRT32Q14532 448 aa17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 GIMAP8Q8ND71 665 aaPredicted RBP17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 ATXN2LQ8WWM7 1075 aaKnown RBP17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
SDR39U1-205ENST00000553546 SENP7Q9BQF6 1050 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms