RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SCN10AQ9Y5Y9 1956 aa27.07■■□□□ 1.92
TDP1-205ENST00000553527 STAM2O75886 525 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 TGFB3P10600 412 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 UBA1P22314 1058 aaKnown RBP27.06■■□□□ 1.92
TDP1-205ENST00000553527 ADCY7P51828 1080 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 STK3Q13188 491 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 DGKDQ16760 1214 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 MYSM1Q5VVJ2 828 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 IL17RAQ96F46 866 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 PGBD1Q96JS3 809 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 SPATA33Q96N06 139 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 ALDH8A1Q9H2A2 487 aaPredicted RBP27.06■■□□□ 1.92
TDP1-205ENST00000553527 BCAS3Q9H6U6 928 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 RIC8AQ9NPQ8 531 aa27.06■■□□□ 1.92
TDP1-205ENST00000553527 TRMT13Q9NUP7 481 aaKnown RBP27.06■■□□□ 1.92
TDP1-205ENST00000553527 SOX1O00570 391 aaPredicted RBP27.05■■□□□ 1.92
TDP1-205ENST00000553527 SCG2P13521 617 aa27.05■■□□□ 1.92
TDP1-205ENST00000553527 RBM25P49756 843 aaKnown RBP27.05■■□□□ 1.92
TDP1-205ENST00000553527 SHHQ15465 462 aa27.05■■□□□ 1.92
TDP1-205ENST00000553527 PFKFB3Q16875 520 aaPredicted RBP27.05■■□□□ 1.92
TDP1-205ENST00000553527 EMID1Q96A84 441 aaPredicted RBP27.05■■□□□ 1.92
TDP1-205ENST00000553527 INPP4AQ96PE3 977 aaPredicted RBP27.05■■□□□ 1.92
TDP1-205ENST00000553527 SLC26A6Q9BXS9 759 aa27.05■■□□□ 1.92
TDP1-205ENST00000553527 SEZ6LQ9BYH1 1024 aa27.05■■□□□ 1.92
TDP1-205ENST00000553527 SPATA31C2B4DYI2 1134 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 CYP2C18P33260 490 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 EVCP57679 992 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 FPGSQ05932 587 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 HSDL1Q3SXM5 330 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 PPTC7Q8NI37 304 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 LRCH3Q96II8 777 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 TMEM260Q9NX78 707 aa27.04■■□□□ 1.92
TDP1-205ENST00000553527 hCG_1984214I3L0E3 225 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 PRPF3O43395 683 aaKnown RBP27.03■■□□□ 1.92
TDP1-205ENST00000553527 FIBPO43427 364 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 ZNF286BP0CG31 522 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 EPHB4P54760 987 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 C9orf50Q5SZB4 431 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 PPP1R18Q6NYC8 613 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 XRRA1Q6P2D8 792 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 CYFIP1Q7L576 1253 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 NLRX1Q86UT6 975 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 ZNF713Q8N859 430 aaPredicted RBP27.03■■□□□ 1.92
TDP1-205ENST00000553527 ALG1Q9BT22 464 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 HIPK3Q9H422 1215 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 EHMT1Q9H9B1 1298 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 LAMA3Q16787 3333 aa27.03■■□□□ 1.92
TDP1-205ENST00000553527 NID2Q14112 1375 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 CYP2C9P11712 490 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 ICAM3P32942 547 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 SEMA3FQ13275 785 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 NTRK3Q16288 839 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 PKN1Q16512 942 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 MFSD5Q6N075 450 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 TBC1D32Q96NH3 1257 aa27.02■■□□□ 1.92
TDP1-205ENST00000553527 UMODL1Q5DID0 1318 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 SP4Q02446 784 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 NEDD9Q14511 834 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 NFRKBQ6P4R8 1299 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 KAT2BQ92831 832 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 ZNF274Q96GC6 653 aaPredicted RBP27.01■■□□□ 1.91
TDP1-205ENST00000553527 PKD2L1Q9P0L9 805 aa27.01■■□□□ 1.91
TDP1-205ENST00000553527 TRIP12Q14669 1992 aaPredicted RBP27■■□□□ 1.91
TDP1-205ENST00000553527 SZT2Q5T011 3432 aa27■■□□□ 1.91
TDP1-205ENST00000553527 NOP56O00567 594 aaKnown RBP27■■□□□ 1.91
TDP1-205ENST00000553527 CPLX1O14810 134 aa27■■□□□ 1.91
TDP1-205ENST00000553527 PPFIA4O75335 1185 aa27■■□□□ 1.91
TDP1-205ENST00000553527 SUPT20HL2P0C7V6 817 aa27■■□□□ 1.91
TDP1-205ENST00000553527 CSF2RAP15509 400 aa27■■□□□ 1.91
TDP1-205ENST00000553527 IFNAR1P17181 557 aa27■■□□□ 1.91
TDP1-205ENST00000553527 CCL23P55773 120 aa27■■□□□ 1.91
TDP1-205ENST00000553527 JAKMIP3Q5VZ66 844 aa27■■□□□ 1.91
TDP1-205ENST00000553527 TMEM199Q8N511 208 aa27■■□□□ 1.91
TDP1-205ENST00000553527 NOD1Q9Y239 953 aa27■■□□□ 1.91
TDP1-205ENST00000553527 SLC34A2O95436 690 aa26.99■■□□□ 1.91
TDP1-205ENST00000553527 FOSP01100 380 aaPredicted RBP26.99■■□□□ 1.91
TDP1-205ENST00000553527 ITGB5P18084 799 aa26.99■■□□□ 1.91
TDP1-205ENST00000553527 PSEN2P49810 448 aa26.99■■□□□ 1.91
TDP1-205ENST00000553527 LRIT3Q3SXY7 679 aa26.99■■□□□ 1.91
TDP1-205ENST00000553527 RNF26Q9BY78 433 aaPredicted RBP26.99■■□□□ 1.91
TDP1-205ENST00000553527 ANO3Q9BYT9 981 aa26.99■■□□□ 1.91
TDP1-205ENST00000553527 LAMA2P24043 3122 aaKnown RBP26.98■■□□□ 1.91
TDP1-205ENST00000553527 ATP9AO75110 1047 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 ACRP10323 421 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 SSRP1Q08945 709 aaKnown RBP26.98■■□□□ 1.91
TDP1-205ENST00000553527 MTMR1Q13613 665 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 MFSD10Q14728 455 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 C7orf31Q8N865 590 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 NOC4LQ9BVI4 516 aaKnown RBP26.98■■□□□ 1.91
TDP1-205ENST00000553527 GLT8D2Q9H1C3 349 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 C6orf50Q9HD87 102 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 TELO2Q9Y4R8 837 aa26.98■■□□□ 1.91
TDP1-205ENST00000553527 ADAMTS3O15072 1205 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 PTPN11Q06124 597 aaPredicted RBP26.97■■□□□ 1.91
TDP1-205ENST00000553527 PTGISQ16647 500 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 KIAA0753Q2KHM9 967 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 METTL7BQ6UX53 244 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 TRIM22Q8IYM9 498 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 CCDC12Q8WUD4 166 aaPredicted RBP26.97■■□□□ 1.91
TDP1-205ENST00000553527 GPRASP2Q96D09 838 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms