RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 HSDL1Q3SXM5 330 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 LRIT3Q3SXY7 679 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 CRYGNQ8WXF5 182 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 CUL5Q93034 780 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 VWCEQ96DN2 955 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 UBE2OQ9C0C9 1292 aaKnown RBP22.16■■□□□ 1.14
PTCH1-227ENST00000553256 NCOA5Q9HCD5 579 aaKnown RBP22.16■■□□□ 1.14
PTCH1-227ENST00000553256 PCDHA6Q9UN73 950 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 PCDHA8Q9Y5H6 950 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 UBIAD1Q9Y5Z9 338 aa22.16■■□□□ 1.14
PTCH1-227ENST00000553256 ESYT2A0FGR8 921 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 HAS3O00219 553 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 SCG2P13521 617 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 NBPF20Q3BBV1 942 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 C8orf34Q49A92 452 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 NFRKBQ6P4R8 1299 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 PHKBQ93100 1093 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 VTI1AQ96AJ9 217 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 RNF26Q9BY78 433 aaPredicted RBP22.15■■□□□ 1.14
PTCH1-227ENST00000553256 ZMYND12Q9H0C1 365 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 TRPV6Q9H1D0 765 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 PRKAG2Q9UGJ0 569 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 TELO2Q9Y4R8 837 aa22.15■■□□□ 1.14
PTCH1-227ENST00000553256 GGPS1O95749 300 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 F2P00734 622 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 NAPAP54920 295 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 SESTD1Q86VW0 696 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 SENP7Q9BQF6 1050 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 LARP6Q9BRS8 491 aaKnown RBP22.14■■□□□ 1.13
PTCH1-227ENST00000553256 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 RTEL1Q9NZ71 1219 aa22.14■■□□□ 1.13
PTCH1-227ENST00000553256 SMCO2A6NFE2 343 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 FIBPO43427 364 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 CCT2P78371 535 aaKnown RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 BRDTQ58F21 947 aaPredicted RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 C9orf50Q5SZB4 431 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 MFSD5Q6N075 450 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 C16orf59Q7L2K0 433 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 DHX37Q8IY37 1157 aaKnown RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 PPP1R13LQ8WUF5 828 aa22.13■■□□□ 1.13
PTCH1-227ENST00000553256 LBHD1Q9BQE6 289 aaPredicted RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 NOC4LQ9BVI4 516 aaKnown RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 TRMT13Q9NUP7 481 aaKnown RBP22.13■■□□□ 1.13
PTCH1-227ENST00000553256 UMODL1Q5DID0 1318 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 EDIL3O43854 480 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 ATP9AO75110 1047 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 PPFIA4O75335 1185 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 RAG1P15918 1043 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 KCNA2P16389 499 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 PTPN11Q06124 597 aaPredicted RBP22.12■■□□□ 1.13
PTCH1-227ENST00000553256 DGKDQ16760 1214 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 GNPTABQ3T906 1256 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 GPRASP2Q96D09 838 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 C16orf70Q9BSU1 422 aa22.12■■□□□ 1.13
PTCH1-227ENST00000553256 NAP1L2Q9ULW6 460 aaPredicted RBP22.12■■□□□ 1.13
PTCH1-227ENST00000553256 ADCY7P51828 1080 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 SHHQ15465 462 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 METTL7BQ6UX53 244 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 WNT8AQ9H1J5 351 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 TMEM260Q9NX78 707 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
PTCH1-227ENST00000553256 SPDYE3A6NKU9 549 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 TLR3O15455 904 aaKnown RBP22.1■■□□□ 1.13
PTCH1-227ENST00000553256 PPFIA3O75145 1194 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 FOSP01100 380 aaPredicted RBP22.1■■□□□ 1.13
PTCH1-227ENST00000553256 HOXC8P31273 242 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 SREBF1P36956 1147 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 AP3B2Q13367 1082 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 HIC1Q14526 733 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 CYP2W1Q8TAV3 490 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 LRCH3Q96II8 777 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 PGBD1Q96JS3 809 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 SPATA33Q96N06 139 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 GPR20Q99678 358 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 ANO3Q9BYT9 981 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 JADE2Q9NQC1 790 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 MYH7BA7E2Y1 1941 aa22.1■■□□□ 1.13
PTCH1-227ENST00000553256 SCRN1Q12765 414 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 NEDD9Q14511 834 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 NPY5RQ15761 445 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 RASIP1Q5U651 963 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 KIF2CQ99661 725 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 GLT8D2Q9H1C3 349 aa22.09■■□□□ 1.13
PTCH1-227ENST00000553256 SORBS3O60504 671 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 PFKFB2O60825 505 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 ZNF286BP0CG31 522 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 CYP2C18P33260 490 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 PSEN2P49810 448 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 AK2P54819 239 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 FPGSQ05932 587 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 CYFIP1Q7L576 1253 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 MXRA8Q9BRK3 442 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 SLC26A6Q9BXS9 759 aa22.08■■□□□ 1.13
PTCH1-227ENST00000553256 MEIS1O00470 390 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 MAFGO15525 162 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 CTDNEP1O95476 244 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 CYP3A4P08684 503 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 CYP2C9P11712 490 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 CSF2RAP15509 400 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 GDF6Q6KF10 455 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms