RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 HSP90AA1P07900 732 aaKnown RBP13.12□□□□□ -0.31
TMEM116-218ENST00000552839 ACTN1P12814 892 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
TMEM116-218ENST00000552839 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
TMEM116-218ENST00000552839 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 PPP1R13LQ8WUF5 828 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 ARNTL2Q8WYA1 636 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 HLA-CQ95604 372 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 ZNF274Q96GC6 653 aaPredicted RBP13.12□□□□□ -0.31
TMEM116-218ENST00000552839 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
TMEM116-218ENST00000552839 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 LPXNO60711 386 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 MYL3P08590 195 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 IQCF3P0C7M6 154 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 SLC16A2P36021 539 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
TMEM116-218ENST00000552839 TROAPQ12815 778 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 GRB10Q13322 594 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 BECN1Q14457 450 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 HOMER1Q86YM7 354 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 PIBF1Q8WXW3 757 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 KIF2CQ99661 725 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 AGXT2Q9BYV1 514 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 VAT1LQ9HCJ6 419 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
TMEM116-218ENST00000552839 PRR12Q9ULL5 1215 aa13.11□□□□□ -0.31
TMEM116-218ENST00000552839 KIF28PB7ZC32 967 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 GPR37L1O60883 481 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 PDIA3P30101 505 aaKnown RBP13.1□□□□□ -0.31
TMEM116-218ENST00000552839 RFC2P35250 354 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
TMEM116-218ENST00000552839 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 FAM47CQ5HY64 1035 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
TMEM116-218ENST00000552839 MTG1Q9BT17 334 aaPredicted RBP13.1□□□□□ -0.31
TMEM116-218ENST00000552839 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMEM116-218ENST00000552839 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 CCPG1Q9ULG6 757 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
TMEM116-218ENST00000552839 RBM47A0AV96 593 aaKnown RBP13.09□□□□□ -0.31
TMEM116-218ENST00000552839 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 PLEKHA8P1O95397 391 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 CPT1AP50416 773 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 TRAF1Q13077 416 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
TMEM116-218ENST00000552839 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
TMEM116-218ENST00000552839 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
TMEM116-218ENST00000552839 PNMA2Q9UL42 364 aa13.09□□□□□ -0.31
TMEM116-218ENST00000552839 BRWD1Q9NSI6 2320 aa13.08□□□□□ -0.31
TMEM116-218ENST00000552839 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
TMEM116-218ENST00000552839 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 NFIBO00712 420 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 PFKFB2O60825 505 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 ICAM1P05362 532 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
TMEM116-218ENST00000552839 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 NECAB1Q8N987 351 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 ADD3Q9UEY8 706 aaKnown RBP13.08□□□□□ -0.32
TMEM116-218ENST00000552839 KIF3AQ9Y496 699 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 SIP14410 1827 aa13.08□□□□□ -0.32
TMEM116-218ENST00000552839 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 EVCP57679 992 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
TMEM116-218ENST00000552839 ME3Q16798 604 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 USH1GQ495M9 461 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
TMEM116-218ENST00000552839 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
TMEM116-218ENST00000552839 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 GDPD5Q8WTR4 605 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 COPS5Q92905 334 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms