RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 Q8TCH9 128 aa6.07□□□□□ -1.44
USP44-207ENST00000552237 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
USP44-207ENST00000552237 CSRNP2Q9H175 543 aa6.07□□□□□ -1.44
USP44-207ENST00000552237 COA3Q9Y2R0 106 aaPredicted RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 MYO1BO43795 1136 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 INHBEP58166 350 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 NFATC3Q12968 1075 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 CHRNA2Q15822 529 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 COPS5Q92905 334 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 MEGF9Q9H1U4 602 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 DTLQ9NZJ0 730 aa6.06□□□□□ -1.44
USP44-207ENST00000552237 TIMM13Q9Y5L4 95 aaPredicted RBP6.06□□□□□ -1.44
USP44-207ENST00000552237 INF2Q27J81 1249 aa6.05□□□□□ -1.44
USP44-207ENST00000552237 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
USP44-207ENST00000552237 IQCEQ6IPM2 695 aa6.05□□□□□ -1.44
USP44-207ENST00000552237 CEP68Q76N32 757 aa6.05□□□□□ -1.44
USP44-207ENST00000552237 ZCCHC14Q8WYQ9 949 aaKnown RBP6.05□□□□□ -1.44
USP44-207ENST00000552237 ZNF652Q9Y2D9 606 aa6.05□□□□□ -1.44
USP44-207ENST00000552237 ANKRD34BA5PLL1 514 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 NOP56O00567 594 aaKnown RBP6.04□□□□□ -1.44
USP44-207ENST00000552237 ZNF76P36508 570 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 EIF6P56537 245 aaKnown RBP6.04□□□□□ -1.44
USP44-207ENST00000552237 FOXE3Q13461 319 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 RALYLQ86SE5 291 aaKnown RBP6.04□□□□□ -1.44
USP44-207ENST00000552237 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 CHFRQ96EP1 664 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 TMEM169Q96HH4 297 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 PCDHB4Q9Y5E5 795 aa6.04□□□□□ -1.44
USP44-207ENST00000552237 HGSO14964 777 aaPredicted RBP6.03□□□□□ -1.44
USP44-207ENST00000552237 ZNF202O95125 648 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 TGM1P22735 817 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 GTF2A2P52657 109 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 PPP2R5EQ16537 467 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 TMC5Q6UXY8 1006 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 RNF207Q6ZRF8 634 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 IFNL2Q8IZJ0 200 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
USP44-207ENST00000552237 GIMAP8Q8ND71 665 aaPredicted RBP6.03□□□□□ -1.44
USP44-207ENST00000552237 BVESQ8NE79 360 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 KLHL6Q8WZ60 621 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 PCDHGB7Q9Y5F8 929 aa6.03□□□□□ -1.44
USP44-207ENST00000552237 A0A1W2PQH9 124 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 NAT2P11245 290 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 BCL6P41182 706 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 PURAQ00577 322 aaKnown RBP6.02□□□□□ -1.45
USP44-207ENST00000552237 COL9A2Q14055 689 aaPredicted RBP6.02□□□□□ -1.45
USP44-207ENST00000552237 ZNF394Q53GI3 561 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 STEAP3Q658P3 488 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 KIAA1211LQ6NV74 962 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 ARRDC4Q8NCT1 418 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 GNRHR2Q96P88 292 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 LRRC37BQ96QE4 947 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 LMF1Q96S06 567 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 APEX2Q9UBZ4 518 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 EMC9Q9Y3B6 208 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 X6R8D5 127 aa6.02□□□□□ -1.45
USP44-207ENST00000552237 MCM7P33993 719 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 MIIPQ5JXC2 388 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 GTF2IRD2BQ6EKJ0 949 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 GTF2IRD2Q86UP8 949 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 OR6P1Q8NGX9 317 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 DIO2Q92813 273 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 CHAMP1Q96JM3 812 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 APBA2Q99767 749 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 SEC61A2Q9H9S3 476 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 ADAM29Q9UKF5 820 aa6.01□□□□□ -1.45
USP44-207ENST00000552237 ZNF568Q3ZCX4 644 aa6□□□□□ -1.45
USP44-207ENST00000552237 USP39Q53GS9 565 aaKnown RBP6□□□□□ -1.45
USP44-207ENST00000552237 E4F1Q66K89 784 aaPredicted RBP6□□□□□ -1.45
USP44-207ENST00000552237 VHLLQ6RSH7 139 aa6□□□□□ -1.45
USP44-207ENST00000552237 MRRFQ96E11 262 aaKnown RBP6□□□□□ -1.45
USP44-207ENST00000552237 CEP89Q96ST8 783 aa6□□□□□ -1.45
USP44-207ENST00000552237 BACH2Q9BYV9 841 aa6□□□□□ -1.45
USP44-207ENST00000552237 CYP26B1Q9NR63 512 aa6□□□□□ -1.45
USP44-207ENST00000552237 ZFR2Q9UPR6 939 aaKnown RBP6□□□□□ -1.45
USP44-207ENST00000552237 TCRBV5S2A0A599 114 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 FOXS1O43638 330 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 CNOT4O95628 575 aaKnown RBP5.99□□□□□ -1.45
USP44-207ENST00000552237 PTH1RQ03431 593 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 KCNAB2Q13303 367 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 TCTN3Q6NUS6 607 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 NLRP10Q86W26 655 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 Q8N1Y9 231 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 NUDT10Q8NFP7 164 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 FRS2Q8WU20 508 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 NUDT11Q96G61 164 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 TRIM8Q9BZR9 551 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
USP44-207ENST00000552237 MEFVO15553 781 aaPredicted RBP5.98□□□□□ -1.45
USP44-207ENST00000552237 PPFIA2O75334 1257 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 DGKIO75912 1065 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 FBXO21O94952 628 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 LRG1P02750 347 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 GIPRP48546 466 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 LSM12Q3MHD2 195 aaKnown RBP5.98□□□□□ -1.45
USP44-207ENST00000552237 VASNQ6EMK4 673 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms