RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 PI4K2BG5E9Z4 385 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 HOXD8P13378 290 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 PTPROQ16827 1216 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 LEXMQ3ZCV2 418 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 JMJD4Q9H9V9 463 aa16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 MAP3K20Q9NYL2 800 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-210ENST00000551981 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 RSPH10B2B2RC85 870 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 RSPH10BP0C881 870 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 SDSP20132 328 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 KCNA5P22460 613 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 THPOP40225 353 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 HSD17B4P51659 736 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 WNT8BQ93098 351 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 PIEZO1Q92508 2521 aa16.51■□□□□ 0.23
CHMP1A-210ENST00000551981 B4E1Z4 1266 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 GGPS1O95749 300 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 SSTR3P32745 418 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 GHRHRQ02643 423 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 PUS10Q3MIT2 529 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 CELF3Q5SZQ8 465 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 FAM178BQ8IXR5 827 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 MYOCDQ8IZQ8 938 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 GJD3Q8N144 294 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 PDCD2LQ9BRP1 358 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 C17orf80Q9BSJ5 609 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 KRT23Q9C075 422 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
CHMP1A-210ENST00000551981 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 TGFB3P10600 412 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 TRAF1Q13077 416 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 HSDL1Q3SXM5 330 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 TIGD5Q53EQ6 642 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 PTCRAQ6ISU1 281 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 STOX1Q6ZVD7 989 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 DBF4BQ8NFT6 615 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 ZSWIM5Q9P217 1185 aa16.49■□□□□ 0.23
CHMP1A-210ENST00000551981 HIP1O00291 1037 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 ZBTB5O15062 677 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 SORBS3O60504 671 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 RGS20O76081 388 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 ALADP13716 330 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 CCND2P30279 289 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 PGM5Q15124 567 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 CWC27Q6UX04 472 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 VSIG10LQ86VR7 867 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 SEPT8Q92599 483 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 ATP6V0A1Q93050 837 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 YME1L1Q96TA2 773 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 MLXIPQ9HAP2 919 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
CHMP1A-210ENST00000551981 PRR33A8MZF0 331 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 H3BRB1 525 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 OPLAHO14841 1288 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 CAND2O75155 1236 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 HIC1Q14526 733 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 C16orf70Q9BSU1 422 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 DSCC1Q9BVC3 393 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
CHMP1A-210ENST00000551981 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 GCOM1H8Y6P7 765 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms