RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 MRPS9P82933 396 aaKnown RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 LAMC2Q13753 1193 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 LBHD1Q9BQE6 289 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 ANO3Q9BYT9 981 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 UPF3AQ9H1J1 476 aaKnown RBP12.14□□□□□ -0.47
PTCH1-225ENST00000551845 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 PCDHA4Q9UN74 947 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 SPATA31C2B4DYI2 1134 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 RGS20O76081 388 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 COL6A1P12109 1028 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 ICAM3P32942 547 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 CPT1AP50416 773 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 ACLYP53396 1101 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 FSCN1Q16658 493 aaKnown RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 IL31RAQ8NI17 732 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 COPS5Q92905 334 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 GLT1D1Q96MS3 346 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 PHF24Q9UPV7 400 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
PTCH1-225ENST00000551845 BAZ2BQ9UIF8 2168 aaKnown RBP12.13□□□□□ -0.47
PTCH1-225ENST00000551845 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 FIBPO43427 364 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 KPNA6O60684 536 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 CABYRO75952 493 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 ARIH2O95376 493 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 ASGR1P07306 291 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
PTCH1-225ENST00000551845 BEX3Q00994 111 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 TRIM29Q14134 588 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 NEDD9Q14511 834 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 LRRC26Q2I0M4 334 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 MLXIPQ9HAP2 919 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 JADE2Q9NQC1 790 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 UBIAD1Q9Y5Z9 338 aa12.12□□□□□ -0.47
PTCH1-225ENST00000551845 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 A6NJR5 290 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 CTAGE5O15320 804 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 JAK2O60674 1132 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 DTNBO60941 627 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 CYP3A4P08684 503 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 ITGB5P18084 799 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 SREBF1P36956 1147 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 ARHGAP4P98171 946 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 SP2Q02086 613 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 CELF3Q5SZQ8 465 aaKnown RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 MAFAQ8NHW3 353 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-225ENST00000551845 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 TMX3Q96JJ7 454 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 PHF20Q9BVI0 1012 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 BRMS1Q9HCU9 246 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 ELP1O95163 1332 aa12.11□□□□□ -0.47
PTCH1-225ENST00000551845 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 GGPS1O95749 300 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 MYL3P08590 195 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 PTGS1P23219 599 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 USP11P51784 963 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 MTMR1Q13613 665 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 CXCL17Q6UXB2 119 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
PTCH1-225ENST00000551845 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms