RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 DCAF4Q8WV16 495 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 ATP6V0A1Q93050 837 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 INO80B-WBP1J3KQ70 363 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 KCNK3O14649 394 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 NDUFB10O96000 172 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 DDIT3P35638 169 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 RABEP2Q9H5N1 569 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 NAA35Q5VZE5 725 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
LGR5-206ENST00000550851 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
LGR5-206ENST00000550851 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 GOLGA8IPA6NC78 632 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 GOLGA8JA6NMD2 632 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 TEX33O43247 280 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 H2AFZP0C0S5 128 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 MARK3P27448 753 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 ATP2C1P98194 919 aaPredicted RBP12.79□□□□□ -0.36
LGR5-206ENST00000550851 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
LGR5-206ENST00000550851 H2AFVQ71UI9 128 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 EHHADHQ08426 723 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 SLC10A5Q5PT55 438 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 NDST4Q9H3R1 872 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 RIC8AQ9NPQ8 531 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 Q3C1V9 767 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 HDXQ7Z353 690 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 CDAN1Q8IWY9 1227 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 CCDC26Q8TAB7 109 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 PHF20Q9BVI0 1012 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 ZNRF3Q9ULT6 936 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
LGR5-206ENST00000550851 ABCB11O95342 1321 aa12.79□□□□□ -0.36
LGR5-206ENST00000550851 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 PDXDC2PQ6P474 469 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■□□ 17.8
LGR5-206ENST00000550851 FAM133AQ8N9E0 248 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 TMEM39BQ9GZU3 492 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 KMT5AQ9NQR1 393 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 PDHBP11177 359 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 FCER1AP12319 257 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 CXCR5P32302 372 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 HPDP32754 393 aaPredicted RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 PEX3P56589 373 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 OSTNP61366 133 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 C1orf112Q9NSG2 853 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 RNF181Q9P0P0 153 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 TNS2Q63HR2 1409 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 OPA1O60313 960 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 DPEP1P16444 411 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 GOLGA5Q8TBA6 731 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 RSPH14Q9UHP6 348 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 MYL1P05976 194 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 CDC25BP30305 580 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 VPS41P49754 854 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 HMGCS2P54868 508 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 LIN9Q5TKA1 542 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 NRBP2Q9NSY0 501 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 RNF146Q9NTX7 359 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
LGR5-206ENST00000550851 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
LGR5-206ENST00000550851 PSMD14O00487 310 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.36
LGR5-206ENST00000550851 NT5C2P49902 561 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 TUBB4BP68371 445 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 MTMR1Q13613 665 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 MICALL2Q8IY33 904 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 PRPF38AQ8NAV1 312 aaKnown RBP12.77□□□□□ -0.36
LGR5-206ENST00000550851 DPF2Q92785 391 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 FERMT1Q9BQL6 677 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 RGL1Q9NZL6 768 aa12.77□□□□□ -0.36
LGR5-206ENST00000550851 ASIC3Q9UHC3 531 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms