RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 H2AFZP0C0S5 128 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 RSPH10BP0C881 870 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 RAB14P61106 215 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 MRPS9P82933 396 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 CDC37Q16543 378 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 GGT6Q6P531 493 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 H2AFVQ71UI9 128 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 MYCBPAPQ8TBZ2 947 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 ESR2Q92731 530 aa9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 RPAP3Q9H6T3 665 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-220ENST00000550584 GOLGA8IPA6NC78 632 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 H0Y3Z8 333 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 GOLGA8RI6L899 631 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ATICP31939 592 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ADCY8P40145 1251 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 KIF23Q02241 960 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 RNF169Q8NCN4 708 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 STKLD1Q8NE28 680 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 SNRNP27Q8WVK2 155 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 SSX2IPQ9Y2D8 614 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PABPN1LA6NDY0 278 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 RNF113AO15541 343 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 DNAJC6O75061 913 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ECEL1O95672 775 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 MAP4P27816 1152 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PPARGP37231 505 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ARID5AQ03989 594 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 FLOT2Q14254 428 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 RCN1Q15293 331 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 LONRF3Q496Y0 759 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 LENG1Q96BZ8 264 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 CCDC8Q9H0W5 538 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 L1RE1Q9UN81 338 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ITIH6Q6UXX5 1313 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 USP27XA6NNY8 438 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 H0Y626 953 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 HMGB3O15347 200 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 VAMP4O75379 141 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 MYBL2P10244 700 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ACTN1P12814 892 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 E4F1Q66K89 784 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 B3GNT6Q6ZMB0 384 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 DRAXINQ8NBI3 349 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 MEIS3Q99687 375 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PLGRKTQ9HBL7 147 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 BABAM1Q9NWV8 329 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PKD2L2Q9NZM6 624 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 DBF4Q9UBU7 674 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 LCMT1Q9UIC8 334 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 SMG5Q9UPR3 1016 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 C2CD2Q9Y426 696 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 IQANK1A0A1B0GTG1 560 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 A8MXQ7 604 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 GUCY1B2O75343 617 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 EIF2B2P49770 351 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 GUCY1A3Q02108 690 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 DMPKQ09013 629 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 MTA1Q13330 715 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 SLC39A14Q15043 492 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ABHD8Q96I13 439 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 TGS1Q96RS0 853 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 PCDHA13Q9Y5I0 950 aa9.48□□□□□ -0.89
PPFIA2-220ENST00000550584 IGF2BP3O00425 579 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 KRT14P02533 472 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 DDIT3P35638 169 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 PMS2P54278 862 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 DR1Q01658 176 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 THOC7Q6I9Y2 204 aaKnown RBP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FAM43BQ6ZT52 329 aaPredicted RBP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 RSRC2Q7L4I2 434 aaKnown RBP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 C6orf50Q9HD87 102 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 STMN3Q9NZ72 180 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 STAP2Q9UGK3 403 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FAM25AB3EWG3 89 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FAM25CB3EWG5 89 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FAM25GB3EWG6 89 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 BIRC5O15392 142 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 FKBP6O75344 327 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 NPTXRO95502 500 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 ALOX5P09917 674 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 NDUFA8P51970 172 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 OLR1P78380 273 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 RIPK1Q13546 671 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 RGS9BPQ6ZS82 235 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 CRLF3Q8IUI8 442 aa9.47□□□□□ -0.89
PPFIA2-220ENST00000550584 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms