RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	PPP1R12B	O60237	982 aa	Predicted RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	TBC1D12	O60347	775 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	GNA14	O95837	355 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	COPB1	P53618	953 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	CDK17	Q00537	523 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	PICALM	Q13492	652 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	KCNJ12	Q14500	433 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	KARS	Q15046	597 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	SLC35G1	Q2M3R5	365 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	RASGRP2	Q7LDG7	609 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	TMEM139	Q8IV31	216 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	GUF1	Q8N442	669 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	MTMR14	Q8NCE2	650 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	EHBP1	Q8NDI1	1231 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	ZNF397	Q8NF99	534 aa	Predicted RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	ERMN	Q8TAM6	284 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	SH3TC2	Q8TF17	1288 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	FAM20A	Q96MK3	541 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	MBOAT7	Q96N66	472 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	NUCKS1	Q9H1E3	243 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	TMEM60	Q9H2L4	133 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	EHMT1	Q9H9B1	1298 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	INTS13	Q9NVM9	706 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	DNAI1	Q9UI46	699 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	STXBP5L	Q9Y2K9	1186 aa		13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	ZNF646	O15015	1829 aa	Predicted RBP	13.18	□□□□□ -0.3
LETMD1-223	ENST00000550442	GREB1L	Q9C091	1923 aa	Predicted RBP	13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442		A0A087WWV3	80 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442		A0A1W2PQJ5	194 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	UNCX	A6NJT0	531 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	LGALS16	A8MUM7	142 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	ATP8B1	O43520	1251 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	KLRC4	O43908	158 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	MFAP3L	O75121	409 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	GOLGA8H	P0CJ92	632 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	CD44	P16070	742 aa	Known RBP	13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	PRCP	P42785	496 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	SLC1A4	P43007	532 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	FAM193A	P78312	1265 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	EVX2	Q03828	476 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	KRT31	Q15323	416 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	KMT5B	Q4FZB7	885 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	JAKMIP3	Q5VZ66	844 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	HAUS3	Q68CZ6	603 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	KLHL10	Q6JEL2	608 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	GPR153	Q6NV75	609 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	GRAMD1C	Q8IYS0	662 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	DEFB123	Q8N688	67 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	OR8K1	Q8NGG5	319 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	P2RX5	Q93086	422 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	MED15	Q96RN5	788 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	MTR	Q99707	1265 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	AMN	Q9BXJ7	453 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	MAF1	Q9H063	256 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	PCDHA12	Q9UN75	941 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	CTNND2	Q9UQB3	1225 aa		13.17	□□□□□ -0.3
LETMD1-223	ENST00000550442	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	EFCAB8	A8MWE9	144 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	PIK3CD	O00329	1044 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	WNT7A	O00755	349 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	KIF5C	O60282	957 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	MARCH6	O60337	910 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	PLCG1	P19174	1290 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	KRT83	P78385	493 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	CAP1	Q01518	475 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	ABCB5	Q2M3G0	1257 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	FKBP15	Q5T1M5	1219 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	SLFN13	Q68D06	897 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	CENPP	Q6IPU0	288 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	PPP4R3CP	Q6ZMV5	832 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	REXO1L1P	Q8IX06	675 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	CCDC170	Q8IYT3	715 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	LARP4B	Q92615	738 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	CLMN	Q96JQ2	1002 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	TSG101	Q99816	390 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	CCDC94	Q9BW85	323 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	ZFYVE28	Q9HCC9	887 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	ARHGEF10L	Q9HCE6	1279 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	VAT1L	Q9HCJ6	419 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	DDX4	Q9NQI0	724 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	DDX25	Q9UHL0	483 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	FZD1	Q9UP38	647 aa		13.16	□□□□□ -0.3
LETMD1-223	ENST00000550442	MYH8	P13535	1937 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	POTEB2	H3BUK9	544 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	MPHOSPH10	O00566	681 aa	Known RBP	13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	IPO7	O95373	1038 aa	Known RBP	13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	CASQ1	P31415	396 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	CIITA	P33076	1130 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	TEC	P42680	631 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	PPP2R3A	Q06190	1150 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	PDE4D	Q08499	809 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	KIF22	Q14807	665 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	CCDC96	Q2M329	555 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442		Q4G0T1	1027 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	TMEM119	Q4V9L6	283 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	TTI2	Q6NXR4	508 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	FAM83A	Q86UY5	434 aa		13.15	□□□□□ -0.3
LETMD1-223	ENST00000550442	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms