RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 NAPAP54920 295 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 LRRC15Q8TF66 581 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 AENQ8WTP8 325 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 GOLGA8KD6RF30 607 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 CALML3P27482 149 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 MCTP2Q6DN12 878 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 NUP58Q9BVL2 599 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 BICDL2A1A5D9 508 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 CCNE1P24864 410 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 CCDC170Q8IYT3 715 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 TSGA10Q9BZW7 698 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 NDST4Q9H3R1 872 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 MYH2Q9UKX2 1941 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 ANO9A1A5B4 782 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 RAPGEF1Q13905 1077 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 NELFCDQ8IXH7 590 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 GIMAP8Q8ND71 665 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 GJA10Q969M2 543 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 MTMR8Q96EF0 704 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 PCDHA4Q9UN74 947 aa11.87□□□□□ -0.51
SMARCC2-208ENST00000550150 TMCO5BA8MYB1 307 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 KLRC4O43908 158 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 EPS15P42566 896 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 NOX5Q96PH1 765 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 RIOK1Q9BRS2 568 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TRIM31Q9BZY9 425 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 PALMO75781 387 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 DDAH1O94760 285 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TCP1P17987 556 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 PCNTO95613 3336 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 UFL1O94874 794 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 MAP2K2P36507 400 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 ACTN3Q08043 901 aaPredicted RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 MEA1Q16626 185 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 IFT20Q8IY31 132 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TBC1D16Q8TBP0 767 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 CRNKL1Q9BZJ0 848 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-208ENST00000550150 TRAF5O00463 557 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 NR1D1P20393 614 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 HIBADHP31937 336 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 TRAPPC10P48553 1259 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 MECOMQ03112 1051 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 CALML4Q96GE6 196 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 DHTKD1Q96HY7 919 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 DCP1AQ9NPI6 582 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 ADAMTS1Q9UHI8 967 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 SMIM23A6NLE4 172 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 AP1M1Q9BXS5 423 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 PCDHA6Q9UN73 950 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 PCDHA8Q9Y5H6 950 aa11.85□□□□□ -0.51
SMARCC2-208ENST00000550150 GOLGA6L7A0A1B0GV03 622 aa11.84□□□□□ -0.51
SMARCC2-208ENST00000550150 POTEMA6NI47 508 aa11.84□□□□□ -0.51
SMARCC2-208ENST00000550150 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
SMARCC2-208ENST00000550150 LSP1P33241 339 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms