RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HSDL1Q3SXM5 330 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 CELF3Q5SZQ8 465 aaKnown RBP11.25□□□□□ -0.61
HDAC7-229ENST00000549883 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
HDAC7-229ENST00000549883 TET1Q8NFU7 2136 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 CUL5Q93034 780 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-229ENST00000549883 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-229ENST00000549883 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 NID2Q14112 1375 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
HDAC7-229ENST00000549883 ATP9AO75110 1047 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 ACRP10323 421 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 CSF2RAP15509 400 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 ITGB5P18084 799 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 RCAN1P53805 252 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 STK3Q13188 491 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-229ENST00000549883 CYP2W1Q8TAV3 490 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-229ENST00000549883 VWCEQ96DN2 955 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
HDAC7-229ENST00000549883 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 WNT8AQ9H1J5 351 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 PKD2L1Q9P0L9 805 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
HDAC7-229ENST00000549883 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
HDAC7-229ENST00000549883 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
HDAC7-229ENST00000549883 HOXD8P13378 290 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-229ENST00000549883 SCG2P13521 617 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 ICAM3P32942 547 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 CCL23P55773 120 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-229ENST00000549883 SP4Q02446 784 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 FPGSQ05932 587 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-229ENST00000549883 MFSD5Q6N075 450 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 Q7L0L9 218 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 PPTC7Q8NI37 304 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 SCLYQ96I15 445 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 C16orf70Q9BSU1 422 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 SLC26A6Q9BXS9 759 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 UBIAD1Q9Y5Z9 338 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 GBF1Q92538 1859 aa11.23□□□□□ -0.61
HDAC7-229ENST00000549883 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 HAS3O00219 553 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 FIBPO43427 364 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 KPNA6O60684 536 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
HDAC7-229ENST00000549883 PSEN2P49810 448 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 ADCY7P51828 1080 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 DGKDQ16760 1214 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 LRIT3Q3SXY7 679 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 BRDTQ58F21 947 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-229ENST00000549883 JAKMIP3Q5VZ66 844 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-229ENST00000549883 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 WNT8BQ93098 351 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 AIFM3Q96NN9 605 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.22□□□□□ -0.611e-7■■■□□ 18.3
HDAC7-229ENST00000549883 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
HDAC7-229ENST00000549883 KAT6AQ92794 2004 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.61
HDAC7-229ENST00000549883 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 LARGE1O95461 756 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 F2P00734 622 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 ARP10275 920 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 TGFB3P10600 412 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 KCNA2P16389 499 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 IFNAR1P17181 557 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 MFSD10Q14728 455 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 TMEM240Q5SV17 173 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 NFRKBQ6P4R8 1299 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 KCNV1Q6PIU1 500 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 DHX38Q92620 1227 aaKnown RBP11.21□□□□□ -0.61
HDAC7-229ENST00000549883 GPR20Q99678 358 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 JADE2Q9NQC1 790 aa11.21□□□□□ -0.61
HDAC7-229ENST00000549883 VPS54Q9P1Q0 977 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms