RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-209ENST00000548860 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 DDX42Q86XP3 938 aaKnown RBP eCLIP15.6■□□□□ 0.09
CACNB3-209ENST00000548860 ERMNQ8TAM6 284 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 THAP9Q9H5L6 903 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 RGL1Q9NZL6 768 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 TMED8Q6PL24 325 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-209ENST00000548860 ADGRF4Q8IZF3 695 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 ELMO3Q96BJ8 720 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 EMILIN3Q9NT22 766 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 GRAPQ13588 217 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 KCNK18Q7Z418 384 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-209ENST00000548860 CCDC127Q96BQ5 260 aa15.6■□□□□ 0.09
CACNB3-209ENST00000548860 FKBP3Q00688 224 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 CERKLQ49MI3 558 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 GJB7Q6PEY0 223 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 OTUD6BQ8N6M0 293 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 TMOD2Q9NZR1 351 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 CAPN11Q9UMQ6 739 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 GOLGA6L7A0A1B0GV03 622 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 PDE2AO00408 941 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 ZRANB2O95218 330 aaKnown RBP eCLIP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 COPB2P35606 906 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 USP14P54578 494 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 FUT2Q10981 343 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 SEPT2Q15019 361 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 TTC31Q49AM3 519 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 RSRC2Q7L4I2 434 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 OR2W6PQ8NHA6 318 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 FAM71BQ8TC56 605 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 PAIP2Q9BPZ3 127 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 E7EVH7 732 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 OPA1O60313 960 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 RPS6KA4O75676 772 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 XRCC5P13010 732 aaKnown RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 KCNJ6P48051 423 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 TMEM132AQ24JP5 1023 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 TAB3Q8N5C8 712 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 TSGA10Q9BZW7 698 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 ZNF211Q13398 564 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-209ENST00000548860 GOLGA5Q8TBA6 731 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 MGARPQ8TDB4 240 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 PACSIN1Q9BY11 444 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
CACNB3-209ENST00000548860 GSTTP1A0A1W2PQM5 241 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 EXOC3O60645 756 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 MYBL2P10244 700 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 ARHGAP25P42331 645 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 FAM83BQ5T0W9 1011 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 CDCA7Q9BWT1 371 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-209ENST00000548860 CAPS2Q9BXY5 557 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 KRIT1O00522 736 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 ERLIN2O94905 339 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 ICA1Q05084 483 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 COASYQ13057 564 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 TTI2Q6NXR4 508 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 GIMAP8Q8ND71 665 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-209ENST00000548860 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 DDX47Q9H0S4 455 aaKnown RBP15.58■□□□□ 0.08
CACNB3-209ENST00000548860 PCDHAC2Q9Y5I4 1007 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 FLT1P17948 1338 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 MYCLP12524 364 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-209ENST00000548860 NFIAQ12857 509 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 HS2ST1Q7LGA3 356 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 IRF2BP1Q8IU81 584 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 EXOC4Q96A65 974 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 IKZF4Q9H2S9 585 aa15.58■□□□□ 0.08
CACNB3-209ENST00000548860 RBM12Q9NTZ6 932 aaKnown RBP15.58■□□□□ 0.08
CACNB3-209ENST00000548860 TTLL1O95922 423 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 SLC9A1P19634 815 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 SLCO1A2P46721 670 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 PRKG1Q13976 671 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 ZNF746Q6NUN9 644 aaPredicted RBP15.57■□□□□ 0.08
CACNB3-209ENST00000548860 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 IFT20Q8IY31 132 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 DUSP9Q99956 384 aaKnown RBP15.57■□□□□ 0.08
CACNB3-209ENST00000548860 L1RE1Q9UN81 338 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 JRKLQ9Y4A0 524 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 SRGNP10124 158 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 SFR1Q86XK3 245 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 BCL9O00512 1426 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 C5P01031 1676 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
CACNB3-209ENST00000548860 CCDC169A6NNP5 214 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 EPB41P11171 864 aaKnown RBP15.57■□□□□ 0.08
CACNB3-209ENST00000548860 EXOC3L4Q17RC7 722 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 KRT71Q3SY84 523 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 KIAA0895Q8NCT3 520 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 LRRC27Q9C0I9 530 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 PTPN22Q9Y2R2 807 aa15.57■□□□□ 0.08
CACNB3-209ENST00000548860 REXO2Q9Y3B8 237 aaKnown RBP15.57■□□□□ 0.08
CACNB3-209ENST00000548860 TOM1O60784 492 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms