RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 B4E1Z4 1266 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 LGR5O75473 907 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 ZNF286BP0CG31 522 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 TRIM71Q2Q1W2 868 aaKnown RBP23.33■■□□□ 1.33
GATC-202ENST00000548171 ZNF618Q5T7W0 954 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 SAMD3Q8N6K7 520 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 INSL6Q9Y581 213 aa23.33■■□□□ 1.33
GATC-202ENST00000548171 GPR37L1O60883 481 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 TCTN1Q2MV58 587 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 MYSM1Q5VVJ2 828 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 PDCD2LQ9BRP1 358 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 KRT23Q9C075 422 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 LNPKQ9C0E8 428 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 VAT1LQ9HCJ6 419 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 ZSWIM5Q9P217 1185 aa23.32■■□□□ 1.32
GATC-202ENST00000548171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.31■■□□□ 1.32
GATC-202ENST00000548171 MBTPS1Q14703 1052 aa23.31■■□□□ 1.32
GATC-202ENST00000548171 IMMTQ16891 758 aaKnown RBP23.31■■□□□ 1.32
GATC-202ENST00000548171 CELF3Q5SZQ8 465 aaKnown RBP23.31■■□□□ 1.32
GATC-202ENST00000548171 CWC27Q6UX04 472 aaKnown RBP23.31■■□□□ 1.32
GATC-202ENST00000548171 STOX1Q6ZVD7 989 aa23.31■■□□□ 1.32
GATC-202ENST00000548171 UBAC1Q9BSL1 405 aa23.31■■□□□ 1.32
GATC-202ENST00000548171 UBE2ZQ9H832 354 aaPredicted RBP23.31■■□□□ 1.32
GATC-202ENST00000548171 CNNM2Q9H8M5 875 aa23.31■■□□□ 1.32
GATC-202ENST00000548171 HIP1O00291 1037 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 OPLAHO14841 1288 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 AMHP03971 560 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 TGFB3P10600 412 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 HOXD11P31277 338 aaPredicted RBP23.3■■□□□ 1.32
GATC-202ENST00000548171 LEXMQ3ZCV2 418 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 SERINC5Q86VE9 423 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 WNT8BQ93098 351 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 SPATA33Q96N06 139 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 DIAPH3Q9NSV4 1193 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 CTNNA3Q9UI47 895 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 NLRC5Q86WI3 1866 aa23.3■■□□□ 1.32
GATC-202ENST00000548171 RSPH10B2B2RC85 870 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 RGS20O76081 388 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 RSPH10BP0C881 870 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 MYCLP12524 364 aaPredicted RBP23.29■■□□□ 1.32
GATC-202ENST00000548171 TRAF1Q13077 416 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 FAM117BQ6P1L5 589 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 VSIG10LQ86VR7 867 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 FBXO22Q8NEZ5 403 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 OSBPL3Q9H4L5 887 aa23.29■■□□□ 1.32
GATC-202ENST00000548171 PI4K2BG5E9Z4 385 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 ZBTB5O15062 677 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 GGPS1O95749 300 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 THPOP40225 353 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 HTRA4P83105 476 aaPredicted RBP23.28■■□□□ 1.32
GATC-202ENST00000548171 ZNF200P98182 395 aaPredicted RBP23.28■■□□□ 1.32
GATC-202ENST00000548171 MKRN4PQ13434 485 aaPredicted RBP23.28■■□□□ 1.32
GATC-202ENST00000548171 AAMPQ13685 434 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 HSDL1Q3SXM5 330 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 MTMR8Q96EF0 704 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 PCDHA1Q9Y5I3 950 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 RALGAPA2Q2PPJ7 1873 aa23.28■■□□□ 1.32
GATC-202ENST00000548171 KAT6AQ92794 2004 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 PGM5Q15124 567 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.32
GATC-202ENST00000548171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.27■■□□□ 1.32
GATC-202ENST00000548171 SMC5Q8IY18 1101 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 DBF4BQ8NFT6 615 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 SP7Q8TDD2 431 aaPredicted RBP23.27■■□□□ 1.32
GATC-202ENST00000548171 KHSRPQ92945 711 aaKnown RBP eCLIP23.27■■□□□ 1.32
GATC-202ENST00000548171 SAMD11Q96NU1 681 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 C16orf70Q9BSU1 422 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 C11orf16Q9NQ32 467 aa23.27■■□□□ 1.32
GATC-202ENST00000548171 COL4A6Q14031 1691 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 BAZ2BQ9UIF8 2168 aaKnown RBP23.26■■□□□ 1.31
GATC-202ENST00000548171 KLRF2D3W0D1 207 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 CAND2O75155 1236 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 UBA1P22314 1058 aaKnown RBP23.26■■□□□ 1.31
GATC-202ENST00000548171 HIC1Q14526 733 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 PTPROQ16827 1216 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 PUS10Q3MIT2 529 aaKnown RBP23.26■■□□□ 1.31
GATC-202ENST00000548171 PLEKHG4Q58EX7 1191 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 STAG2Q8N3U4 1231 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 ATP6V0A1Q93050 837 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 MRPL38Q96DV4 380 aaKnown RBP23.26■■□□□ 1.31
GATC-202ENST00000548171 C17orf80Q9BSJ5 609 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 MLXIPQ9HAP2 919 aa23.26■■□□□ 1.31
GATC-202ENST00000548171 C17orf102A2RUQ5 167 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 H3BRB1 525 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 PPP1R11O60927 126 aaPredicted RBP23.25■■□□□ 1.31
GATC-202ENST00000548171 KCNA5P22460 613 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 CCND2P30279 289 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 HOXC8P31273 242 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 PLEKHM2Q8IWE5 1019 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 FAM178BQ8IXR5 827 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 SEPT8Q92599 483 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 RWDD1Q9H446 243 aaPredicted RBP23.25■■□□□ 1.31
GATC-202ENST00000548171 TUT1Q9H6E5 874 aaKnown RBP23.25■■□□□ 1.31
GATC-202ENST00000548171 CD320Q9NPF0 282 aa23.25■■□□□ 1.31
GATC-202ENST00000548171 HOXA13P31271 388 aaPredicted RBP23.24■■□□□ 1.31
GATC-202ENST00000548171 SP2Q02086 613 aa23.24■■□□□ 1.31
GATC-202ENST00000548171 TIGD5Q53EQ6 642 aa23.24■■□□□ 1.31
GATC-202ENST00000548171 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms