RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 TRIM17Q9Y577 477 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 MKI67P46013 3256 aaKnown RBP9.11□□□□□ -0.95
CCDC65-203ENST00000547861 A0A0U1RQG5 324 aaPredicted RBP9.11□□□□□ -0.95
CCDC65-203ENST00000547861 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 F5H6K3 240 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 KLRC3Q07444 240 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 CRHR2Q13324 411 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 SYDE2Q5VT97 1194 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 OTOP1Q7RTM1 612 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 CABP7Q86V35 215 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 ENOX1Q8TC92 643 aaKnown RBP9.11□□□□□ -0.95
CCDC65-203ENST00000547861 KIAA1524Q8TCG1 905 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 CACTINQ8WUQ7 758 aaKnown RBP9.11□□□□□ -0.95
CCDC65-203ENST00000547861 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 AK8Q96MA6 479 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 TEPSINQ96N21 525 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 MED15Q96RN5 788 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 PTPN18Q99952 460 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 SPTLC3Q9NUV7 552 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 SYNPO2Q9UMS6 1093 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 NFE2L3Q9Y4A8 694 aa9.11□□□□□ -0.95
CCDC65-203ENST00000547861 BMP3P12645 472 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 ZNF18P17022 549 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 PLCG1P19174 1290 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
CCDC65-203ENST00000547861 UBA7P41226 1012 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 CALCRLQ16602 461 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 RRAGBQ5VZM2 374 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 BTNL9Q6UXG8 535 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.1□□□□□ -0.95
CCDC65-203ENST00000547861 TMC6Q7Z403 805 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
CCDC65-203ENST00000547861 IGSF22Q8N9C0 903 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 RASSF8Q8NHQ8 419 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 CD99L2Q8TCZ2 262 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 MTMR9Q96QG7 549 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 CTNND2Q9UQB3 1225 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 BRCA2P51587 3418 aa9.1□□□□□ -0.95
CCDC65-203ENST00000547861 TESPA1A2RU30 521 aaPredicted RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 TMEM232C9JQI7 657 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 CBFA2T2O43439 604 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 TBC1D12O60347 775 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 RPN1P04843 607 aaKnown RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 TAL1P17542 331 aaPredicted RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 MRPL12P52815 198 aaKnown RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 SNAP25P60880 206 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 MAP3K9P80192 1104 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 IKQ13123 557 aaPredicted RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 NOLC1Q14978 699 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 KIAA1755Q5JYT7 1200 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 FILIP1Q7Z7B0 1213 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 ACER1Q8TDN7 264 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 PLIN2Q99541 437 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 MMTAG2Q9BU76 263 aaKnown RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 ANO3Q9BYT9 981 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 CUEDC2Q9H467 287 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 PSTPIP2Q9H939 334 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 MAGEF1Q9HAY2 307 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 INTS13Q9NVM9 706 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.09□□□□□ -0.95
CCDC65-203ENST00000547861 IMPACTQ9P2X3 320 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 PCDHA1Q9Y5I3 950 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 LCTP09848 1927 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 DOCK5Q9H7D0 1870 aa9.09□□□□□ -0.95
CCDC65-203ENST00000547861 USP17L15C9J2P7 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L13C9JLJ4 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L11C9JVI0 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L18D6R9N7 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L22D6RA61 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L17D6RBQ6 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L19D6RCP7 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L20D6RJB6 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 HRO43593 1189 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 SERPINC1P01008 464 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 GCFC2P16383 781 aaKnown RBP9.08□□□□□ -0.96
CCDC65-203ENST00000547861 TECP42680 631 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 UBASH3AP57075 661 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 GSDMDP57764 484 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 CCZ1BP86790 482 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
CCDC65-203ENST00000547861 SP3Q02447 781 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L24Q0WX57 530 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 VGLL4Q14135 290 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 TMEM266Q2M3C6 531 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 HSP90AA4PQ58FG1 418 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 PRPF38BQ5VTL8 546 aaKnown RBP9.08□□□□□ -0.96
CCDC65-203ENST00000547861 PPP4R3AQ6IN85 833 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 KLHL10Q6JEL2 608 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 USP17L6PQ6QN14 398 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 FBXO11Q86XK2 927 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 LRRC8AQ8IWT6 810 aa9.08□□□□□ -0.96
CCDC65-203ENST00000547861 SPICE1Q8N0Z3 855 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms