RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-210ENST00000547654 MMP19Q99542 508 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 C11orf84Q9BUA3 381 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-210ENST00000547654 ZSWIM4Q9H7M6 989 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 CYP26B1Q9NR63 512 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 ACTR10Q9NZ32 417 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 SUGT1Q9Y2Z0 365 aa6.04□□□□□ -1.44
SCAF11-210ENST00000547654 C7orf72A4D263 438 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 MROH6A6NGR9 719 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 SUSD5O60279 629 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 EIF5BO60841 1220 aaKnown RBP6.03□□□□□ -1.44
SCAF11-210ENST00000547654 STK10O94804 968 aaKnown RBP6.03□□□□□ -1.44
SCAF11-210ENST00000547654 GJB6O95452 261 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 ITGAVP06756 1048 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 SF1Q15637 639 aaKnown RBP6.03□□□□□ -1.44
SCAF11-210ENST00000547654 INF2Q27J81 1249 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 TNNI3KQ59H18 835 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 SDE2Q6IQ49 451 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 ZNF227Q86WZ6 799 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 TTLL6Q8N841 843 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 KYQ8NBH2 561 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 GPRC5CQ9NQ84 441 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 TMEFF2Q9UIK5 374 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-210ENST00000547654 AKT3Q9Y243 479 aa6.03□□□□□ -1.44
SCAF11-210ENST00000547654 THBDP07204 575 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 C6P13671 934 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 MCTP2Q6DN12 878 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 CD300LDQ6UXZ3 194 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 APBA2Q99767 749 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCAF11-210ENST00000547654 OSBPL2Q9H1P3 480 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 MARCH2Q9P0N8 246 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 ST6GALNAC2Q9UJ37 374 aa6.02□□□□□ -1.45
SCAF11-210ENST00000547654 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCAF11-210ENST00000547654 CLSTN1O94985 981 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 KCNH1O95259 989 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 TACR2P21452 398 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 GDF5P43026 501 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 SCRN1Q12765 414 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 SLC10A6Q3KNW5 377 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 ZNF662Q6ZS27 426 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 PLEKHH3Q7Z736 793 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 HNRNPLLQ8WVV9 542 aaKnown RBP6.01□□□□□ -1.45
SCAF11-210ENST00000547654 BTG4Q9NY30 223 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 CLEC1BQ9P126 229 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 MSRB2Q9Y3D2 182 aa6.01□□□□□ -1.45
SCAF11-210ENST00000547654 PLS3P13797 630 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 GRIA2P42262 883 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 SLC35F1Q5T1Q4 408 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 LIMS2Q7Z4I7 341 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 MIB1Q86YT6 1006 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 FAM26EQ8N5C1 309 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 TXNDC5Q8NBS9 432 aaKnown RBP6□□□□□ -1.45
SCAF11-210ENST00000547654 SH3RF3Q8TEJ3 882 aaPredicted RBP6□□□□□ -1.45
SCAF11-210ENST00000547654 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 LCORQ96JN0 433 aaPredicted RBP6□□□□□ -1.45
SCAF11-210ENST00000547654 SORCS2Q96PQ0 1159 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 SYT3Q9BQG1 590 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 YIPF4Q9BSR8 244 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 PIF1Q9H611 641 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 FBXL7Q9UJT9 491 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 NPFFR2Q9Y5X5 522 aa6□□□□□ -1.45
SCAF11-210ENST00000547654 DDX3XO00571 662 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCAF11-210ENST00000547654 LAMTOR5O43504 91 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 SSBP05455 408 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCAF11-210ENST00000547654 HMGA2P52926 109 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 GFRA1P56159 465 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 ITGA1P56199 1179 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 RBL2Q08999 1139 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
SCAF11-210ENST00000547654 SURF1Q15526 300 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 PRAMEF18Q5VWM3 479 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 STK32CQ86UX6 486 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 NLRP10Q86W26 655 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 CRACR2BQ8N4Y2 399 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-210ENST00000547654 SEC14L1Q92503 715 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 SCAND2PQ9GZW5 306 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-210ENST00000547654 TBX22Q9Y458 520 aa5.99□□□□□ -1.45
SCAF11-210ENST00000547654 A0A1W2PQU0 124 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 IBSPP21815 317 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-210ENST00000547654 FXNQ16595 210 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 DDR2Q16832 855 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 ACBD5Q5T8D3 534 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-210ENST00000547654 LARP1BQ659C4 914 aaKnown RBP5.98□□□□□ -1.45
SCAF11-210ENST00000547654 SPRED1Q7Z699 444 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 TEX2Q8IWB9 1127 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 CKAP2LQ8IYA6 745 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 MRFAP1L1Q96HT8 127 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
SCAF11-210ENST00000547654 SBNO2Q9Y2G9 1366 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 hCG_2014768A0A024R1R8 64 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 C22orf46C9J442 243 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 SGSM2O43147 1006 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-210ENST00000547654 HOXC12P31275 282 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 STAT5AP42229 794 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 RAB33AQ14088 237 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms