RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 EHBP1Q8NDI1 1231 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 JAKMIP2Q96AA8 810 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
BRF1-212ENST00000547562 TFR2Q9UP52 801 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
BRF1-212ENST00000547562 F5H6K3 240 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 POTEB2H3BUK9 544 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 KRT86O43790 486 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 KLRC3Q07444 240 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 FAM26FQ5R3K3 315 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 GMCL1P1Q8NEA9 526 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 PLAGL2Q9UPG8 496 aa17.24■□□□□ 0.35
BRF1-212ENST00000547562 CTAGE15A4D2H0 777 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 E9PMD0 336 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 GDF11O95390 407 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRF1-212ENST00000547562 CTAGE8P0CG41 777 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 BRD3Q15059 726 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 ZCWPW2Q504Y3 356 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 CTAGE6Q86UF2 777 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 CTAGE4Q8IX94 777 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 CRYGNQ8WXF5 182 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 GMCL1Q96IK5 515 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 UIMC1Q96RL1 719 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 POTECB2RU33 542 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 EPHB6O15197 1021 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 TRAPPC11Q7Z392 1133 aa17.23■□□□□ 0.35
BRF1-212ENST00000547562 FAM207AQ9NSI2 230 aaPredicted RBP17.23■□□□□ 0.35
BRF1-212ENST00000547562 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
BRF1-212ENST00000547562 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 RCCD1A6NED2 376 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 SASH3O75995 380 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 NDUFB10O96000 172 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 FKBP3Q00688 224 aaKnown RBP17.22■□□□□ 0.35
BRF1-212ENST00000547562 TERF2Q15554 542 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 CCDC65Q8IXS2 484 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
BRF1-212ENST00000547562 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 PRDM4Q9UKN5 801 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 CCDC42Q96M95 316 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
BRF1-212ENST00000547562 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
BRF1-212ENST00000547562 ENC1O14682 589 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 SNAP25P60880 206 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 AOC3Q16853 763 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 GPBP1Q86WP2 473 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 ETNPPLQ8TBG4 499 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 COL4A3BPQ9Y5P4 624 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 ENTPD3O75355 529 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 MED24O75448 989 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 ATP1A1P05023 1023 aaKnown RBP17.21■□□□□ 0.35
BRF1-212ENST00000547562 PLEKP08567 350 aaPredicted RBP17.21■□□□□ 0.35
BRF1-212ENST00000547562 STAT3P40763 770 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 VAV2P52735 878 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
BRF1-212ENST00000547562 HAUS3Q68CZ6 603 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 HNRNPLLQ8WVV9 542 aaKnown RBP17.21■□□□□ 0.35
BRF1-212ENST00000547562 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
BRF1-212ENST00000547562 PNKPQ96T60 521 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 ARHGAP20Q9P2F6 1191 aa17.21■□□□□ 0.35
BRF1-212ENST00000547562 TRAF5O00463 557 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 ZNF263O14978 683 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 TBX3O15119 743 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 CYP11B2P19099 503 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
BRF1-212ENST00000547562 SPA17Q15506 151 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 LONRF2Q1L5Z9 754 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 USH1GQ495M9 461 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 Q4G0T1 1027 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 PRR16Q569H4 304 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 FUT8Q9BYC5 575 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 TBC1D7Q9P0N9 293 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 HDAC6Q9UBN7 1215 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 SMCHD1A6NHR9 2005 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 GH2P01242 217 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 ERCC3P19447 782 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 CHRNA5P30532 468 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 JAG1P78504 1218 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 KIF5AQ12840 1032 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 CNKSR1Q969H4 720 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms