RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 KCNH1O95259 989 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 GLI4P10075 376 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 CYP2C8P10632 490 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 PAMP19021 973 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 CACNB2Q08289 660 aaPredicted RBP4.64□□□□□ -1.67
HCFC2-203ENST00000547194 C6orf15Q6UXA7 325 aaPredicted RBP4.64□□□□□ -1.67
HCFC2-203ENST00000547194 CABP7Q86V35 215 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 TRIM59Q8IWR1 403 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 FAM178BQ8IXR5 827 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 CELF2-AS1Q8N7Q2 184 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 MICAL1Q8TDZ2 1067 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 SREK1Q8WXA9 508 aaKnown RBP4.64□□□□□ -1.67
HCFC2-203ENST00000547194 COPS5Q92905 334 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 GORASP1Q9BQQ3 440 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 LGR4Q9BXB1 951 aa4.64□□□□□ -1.67
HCFC2-203ENST00000547194 B2RBV5 119 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 DDX3XO00571 662 aaKnown RBP eCLIP4.63□□□□□ -1.67
HCFC2-203ENST00000547194 B4GALT3O60512 393 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 LMO1P25800 156 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 THBS2P35442 1172 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 NANOS3P60323 173 aaKnown RBP4.63□□□□□ -1.67
HCFC2-203ENST00000547194 RBL2Q08999 1139 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 RAB33AQ14088 237 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 FXNQ16595 210 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 LARP1BQ659C4 914 aaKnown RBP4.63□□□□□ -1.67
HCFC2-203ENST00000547194 GTF2IRD2BQ6EKJ0 949 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 GTF2IRD2Q86UP8 949 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 LZTR1Q8N653 840 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 MRGPRX3Q96LB0 322 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 CYP26B1Q9NR63 512 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 SIT1Q9Y3P8 196 aa4.63□□□□□ -1.67
HCFC2-203ENST00000547194 WDR33Q9C0J8 1336 aaKnown RBP4.63□□□□□ -1.67
HCFC2-203ENST00000547194 C7orf72A4D263 438 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 NPHS1O60500 1241 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 C8BP07358 591 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 PLS3P13797 630 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 RPL13P26373 211 aaKnown RBP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 GTF2F1P35269 517 aaKnown RBP eCLIP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 SELENOPP49908 381 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 SCRN1Q12765 414 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 HNRNPA0Q13151 305 aaKnown RBP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 DDR2Q16832 855 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 FAM26FQ5R3K3 315 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 NBPF6Q5VWK0 638 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 MRM1Q6IN84 353 aaKnown RBP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 NETO2Q8NC67 525 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 TSPAN17Q96FV3 270 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 LCORQ96JN0 433 aaPredicted RBP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 NBPF4Q96M43 638 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 MMP19Q99542 508 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 PTPN18Q99952 460 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 POLR3GLQ9BT43 218 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 MTA3Q9BTC8 594 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 C11orf84Q9BUA3 381 aaPredicted RBP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 CSRNP2Q9H175 543 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 IKZF4Q9H2S9 585 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 GPRC5CQ9NQ84 441 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
HCFC2-203ENST00000547194 CLEC1BQ9P126 229 aa4.62□□□□□ -1.67
HCFC2-203ENST00000547194 SUSD5O60279 629 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 DDAH1O94760 285 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 GJB6O95452 261 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 FUCA1P04066 466 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 CYP1A1P04798 512 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-203ENST00000547194 THBDP07204 575 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 SV2CQ496J9 727 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 MBLAC2Q68D91 279 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 IGFL4Q6B9Z1 124 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 IQCEQ6IPM2 695 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 DNAJC10Q8IXB1 793 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 CKAP2LQ8IYA6 745 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 USP33Q8TEY7 942 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 CEP89Q96ST8 783 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 HIRIP3Q9BW71 556 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-203ENST00000547194 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 NUDT5Q9UKK9 219 aa4.61□□□□□ -1.67
HCFC2-203ENST00000547194 R3HCC1Q9Y3T6 440 aaKnown RBP4.61□□□□□ -1.67
HCFC2-203ENST00000547194 NTRK1P04629 796 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 ITGAVP06756 1048 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 HOXC12P31275 282 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 ABHD18Q0P651 414 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 SERINC3Q13530 473 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 SLC9A5Q14940 896 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 SURF1Q15526 300 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 PRAMEF18Q5VWM3 479 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 EEPD1Q7L9B9 569 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 PLEKHH3Q7Z736 793 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 FAM26EQ8N5C1 309 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 NPLOC4Q8TAT6 608 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 FRS2Q8WU20 508 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 BTN2A2Q8WVV5 523 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 PEX11GQ96HA9 241 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 CCDC140Q96MF4 163 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 EPN3Q9H201 632 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 ST7Q9NRC1 585 aa4.6□□□□□ -1.67
HCFC2-203ENST00000547194 BTG4Q9NY30 223 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms