RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
LINC00661-202ENST00000547102 FIBPO43427 364 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 F2P00734 622 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 RFC2P35250 354 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 PSEN2P49810 448 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 RCAN1P53805 252 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
LINC00661-202ENST00000547102 NEDD9Q14511 834 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 MFSD10Q14728 455 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 PCNX4Q63HM2 1172 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 C16orf59Q7L2K0 433 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 NLRX1Q86UT6 975 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 SESTD1Q86VW0 696 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 HERVK_113Q902F9 699 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 KAT2BQ92831 832 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 SCLYQ96I15 445 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
LINC00661-202ENST00000547102 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
LINC00661-202ENST00000547102 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
LINC00661-202ENST00000547102 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 CNTNAP5Q8WYK1 1306 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 CCDC196A0A1B0GTZ2 297 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 MEIS2O14770 477 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 ACTN1P12814 892 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
LINC00661-202ENST00000547102 DNAJB2P25686 324 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 PSMA5P28066 241 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 HSPA4P34932 840 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00661-202ENST00000547102 NAPAP54920 295 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 RAB30Q15771 203 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 KIAA0753Q2KHM9 967 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 METTL7BQ6UX53 244 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 OTOP2Q7RTS6 562 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 ZNF713Q8N859 430 aaPredicted RBP12.29□□□□□ -0.44
LINC00661-202ENST00000547102 GPKOWQ92917 476 aaPredicted RBP eCLIP12.29□□□□□ -0.44
LINC00661-202ENST00000547102 CDHR1Q96JP9 859 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 BRPF3Q9ULD4 1205 aa12.29□□□□□ -0.44
LINC00661-202ENST00000547102 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 ICAM3P32942 547 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 ADCY7P51828 1080 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
LINC00661-202ENST00000547102 SP2Q02086 613 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 UBE2SQ16763 222 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 HSDL1Q3SXM5 330 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
LINC00661-202ENST00000547102 TEX2Q8IWB9 1127 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
LINC00661-202ENST00000547102 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 KCNB2Q92953 911 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 TIFAQ96CG3 184 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 FTOQ9C0B1 505 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00661-202ENST00000547102 GLT8D2Q9H1C3 349 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 ZNF215Q9UL58 517 aaPredicted RBP12.28□□□□□ -0.44
LINC00661-202ENST00000547102 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
LINC00661-202ENST00000547102 LGALS2P05162 132 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 IQCF3P0C7M6 154 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 Q6ZUG5 572 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 CYFIP1Q7L576 1253 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-202ENST00000547102 SENP7Q9BQF6 1050 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-202ENST00000547102 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-202ENST00000547102 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-202ENST00000547102 SCN5AQ14524 2016 aa12.27□□□□□ -0.45
LINC00661-202ENST00000547102 GRXCR1A8MXD5 290 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 HAS3O00219 553 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
LINC00661-202ENST00000547102 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
LINC00661-202ENST00000547102 CPA1P15085 419 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 FOSL2P15408 326 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 SELPP16109 830 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 RPS6KB1P23443 525 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 SP4Q02446 784 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 PTK7Q13308 1070 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 MTMR1Q13613 665 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 LRRC8DQ7L1W4 858 aa12.26□□□□□ -0.45
LINC00661-202ENST00000547102 BRF1Q92994 677 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms