RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
CCDC38-205ENST00000546947 FPGSQ05932 587 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 PTPN11Q06124 597 aaPredicted RBP16.96■□□□□ 0.31
CCDC38-205ENST00000546947 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
CCDC38-205ENST00000546947 UBE2SQ16763 222 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
CCDC38-205ENST00000546947 RIC8AQ9NPQ8 531 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 PCDHA6Q9UN73 950 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 PCDHA8Q9Y5H6 950 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 DOCK5Q9H7D0 1870 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 LAMA3Q16787 3333 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
CCDC38-205ENST00000546947 PDIA3P30101 505 aaKnown RBP16.95■□□□□ 0.3
CCDC38-205ENST00000546947 ANAPC15P60006 121 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 SP2Q02086 613 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 NEDD9Q14511 834 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
CCDC38-205ENST00000546947 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 NLRX1Q86UT6 975 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 SPATA33Q96N06 139 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 KATNAL1Q9BW62 490 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CCDC38-205ENST00000546947 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SOX1O00570 391 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 PPFIA4O75335 1185 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 HOXD8P13378 290 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SCG2P13521 617 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 ADCY7P51828 1080 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SEMA3FQ13275 785 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 PPIGQ13427 754 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SHHQ15465 462 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 RNF26Q9BY78 433 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
CCDC38-205ENST00000546947 PPP1R12CQ9BZL4 782 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 TRPV6Q9H1D0 765 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 HIPK3Q9H422 1215 aa16.94■□□□□ 0.3
CCDC38-205ENST00000546947 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 IFNAR1P17181 557 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 NTRK3Q16288 839 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 GPR153Q6NV75 609 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 SESTD1Q86VW0 696 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 CCDC12Q8WUD4 166 aaPredicted RBP16.93■□□□□ 0.3
CCDC38-205ENST00000546947 KAT2BQ92831 832 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 GPRASP2Q96D09 838 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 CDHR1Q96JP9 859 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
CCDC38-205ENST00000546947 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 F2P00734 622 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
CCDC38-205ENST00000546947 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
CCDC38-205ENST00000546947 PKN1Q16512 942 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 C9orf50Q5SZB4 431 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 METTL7BQ6UX53 244 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
CCDC38-205ENST00000546947 PHKBQ93100 1093 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 LRCH3Q96II8 777 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 NOC4LQ9BVI4 516 aaKnown RBP16.92■□□□□ 0.3
CCDC38-205ENST00000546947 TRMT13Q9NUP7 481 aaKnown RBP16.92■□□□□ 0.3
CCDC38-205ENST00000546947 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
CCDC38-205ENST00000546947 HAS3O00219 553 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 MAFGO15525 162 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 SORBS3O60504 671 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 CYP2C18P33260 490 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 PSEN2P49810 448 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 EPHB4P54760 987 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 MFSD10Q14728 455 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 MCTP2Q6DN12 878 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 CYFIP1Q7L576 1253 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 ANO3Q9BYT9 981 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 ZMYND12Q9H0C1 365 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
CCDC38-205ENST00000546947 TANC1Q9C0D5 1861 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 NOP56O00567 594 aaKnown RBP16.9■□□□□ 0.3
CCDC38-205ENST00000546947 ZNF286BP0CG31 522 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 CYP2C9P11712 490 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 CSF2RAP15509 400 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 ITGB5P18084 799 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
CCDC38-205ENST00000546947 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 GTF2IRD1Q9UHL9 959 aa16.9■□□□□ 0.3
CCDC38-205ENST00000546947 UMODL1Q5DID0 1318 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms