RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CABYRO75952 493 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 MMP1P03956 469 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 CPT1AP50416 773 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 SP2Q02086 613 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 TRIM29Q14134 588 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 KCNA10Q16322 511 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 FSCN1Q16658 493 aaKnown RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 BRDTQ58F21 947 aaPredicted RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 KIF3AQ9Y496 699 aa16.51■□□□□ 0.23
DDX54-203ENST00000546869 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
DDX54-203ENST00000546869 ELP1O95163 1332 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 ACLYP53396 1101 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 MLLT1Q03111 559 aaPredicted RBP16.5■□□□□ 0.23
DDX54-203ENST00000546869 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 MTMR1Q13613 665 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 KRT40Q6A162 431 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 COPS5Q92905 334 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 HTATIP2Q9BUP3 242 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
DDX54-203ENST00000546869 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 CYP3A7-CYP3A51PA0A087WV96 503 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 EDIL3O43854 480 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 DTNBO60941 627 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 ASGR1P07306 291 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
DDX54-203ENST00000546869 UBA1P22314 1058 aaKnown RBP16.49■□□□□ 0.23
DDX54-203ENST00000546869 CYP3A7P24462 503 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 KRT2P35908 639 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX54-203ENST00000546869 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
DDX54-203ENST00000546869 FAM184AQ8NB25 1140 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 PPTC7Q8NI37 304 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 TBCKQ8TEA7 893 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
DDX54-203ENST00000546869 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
DDX54-203ENST00000546869 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 GJB4Q9NTQ9 266 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 POLR3EQ9NVU0 708 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 KIAA1217Q5T5P2 1943 aa16.49■□□□□ 0.23
DDX54-203ENST00000546869 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 A0A1W2PQ45 241 aaPredicted RBP16.48■□□□□ 0.23
DDX54-203ENST00000546869 A0A1W2PQY0 241 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 FAM86B1E9PN63 330 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 PPFIA4O75335 1185 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 GGPS1O95749 300 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 FAM86B2P0C5J1 330 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 ZNF76P36508 570 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 BEX3Q00994 111 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 SNX17Q15036 470 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 SLC39A5Q6ZMH5 540 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
DDX54-203ENST00000546869 GLT1D1Q96MS3 346 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 BRCA2P51587 3418 aa16.48■□□□□ 0.23
DDX54-203ENST00000546869 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
DDX54-203ENST00000546869 KCNA2P16389 499 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 PTGS1P23219 599 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
DDX54-203ENST00000546869 PURAQ00577 322 aaKnown RBP16.47■□□□□ 0.23
DDX54-203ENST00000546869 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
DDX54-203ENST00000546869 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX54-203ENST00000546869 OXER1Q8TDS5 423 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
DDX54-203ENST00000546869 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
DDX54-203ENST00000546869 NFASCO94856 1347 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 BTBD18B2RXH4 712 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 ATP9AO75110 1047 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
DDX54-203ENST00000546869 MMP3P08254 477 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 DGKDQ16760 1214 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 Q4G0T1 1027 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 PPP4R3AQ6IN85 833 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 PLA2G4DQ86XP0 818 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 DIS3L2Q8IYB7 885 aaKnown RBP16.46■□□□□ 0.23
DDX54-203ENST00000546869 SLC43A3Q8NBI5 491 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 SPATA33Q96N06 139 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 FOXP1Q9H334 677 aaPredicted RBP16.46■□□□□ 0.23
DDX54-203ENST00000546869 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
DDX54-203ENST00000546869 STARD7Q9NQZ5 370 aa16.46■□□□□ 0.23
DDX54-203ENST00000546869 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms