RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 NCAPHQ15003 741 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 TESK1Q15569 626 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 PRAMEF18Q5VWM3 479 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 CRIP3Q6Q6R5 217 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 KREMEN2Q8NCW0 462 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 DNERQ8NFT8 737 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 DIO2Q92813 273 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 TRMT2BQ96GJ1 504 aaKnown RBP7□□□□□ -1.29
CCDC38-204ENST00000546816 FBXL7Q9UJT9 491 aa7□□□□□ -1.29
CCDC38-204ENST00000546816 SCG5P05408 212 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 ATF4P18848 351 aaPredicted RBP6.99□□□□□ -1.29
CCDC38-204ENST00000546816 ACVRL1P37023 503 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 MLLT6P55198 1093 aaPredicted RBP6.99□□□□□ -1.29
CCDC38-204ENST00000546816 ARRDC4Q8NCT1 418 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 BTN2A2Q8WVV5 523 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 KISS1RQ969F8 398 aaPredicted RBP6.99□□□□□ -1.29
CCDC38-204ENST00000546816 KLC2Q9H0B6 622 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 CCSER2Q9H7U1 834 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 DTLQ9NZJ0 730 aa6.99□□□□□ -1.29
CCDC38-204ENST00000546816 TCRBV5S2A0A599 114 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 TBX1O43435 398 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 TADA3O75528 432 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 CYP1A1P04798 512 aaPredicted RBP6.98□□□□□ -1.29
CCDC38-204ENST00000546816 HOXC12P31275 282 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 EPHB4P54760 987 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 KCNAB2Q13303 367 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 ZCCHC14Q8WYQ9 949 aaKnown RBP6.98□□□□□ -1.29
CCDC38-204ENST00000546816 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
CCDC38-204ENST00000546816 TMEM169Q96HH4 297 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 ZSWIM3Q96MP5 696 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 TMEM168Q9H0V1 697 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 L2HGDHQ9H9P8 463 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 STRIP2Q9ULQ0 834 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 WASF3Q9UPY6 502 aa6.98□□□□□ -1.29
CCDC38-204ENST00000546816 NPEPPSL1A6NEC2 478 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 HGSO14964 777 aaPredicted RBP6.97□□□□□ -1.29
CCDC38-204ENST00000546816 LRG1P02750 347 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 SLPIP03973 132 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 GDF5P43026 501 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 PPP2CBP62714 309 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 PPP2CAP67775 309 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 CHRNA2Q15822 529 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 EMC4Q5J8M3 183 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 ACBD5Q5T8D3 534 aaPredicted RBP6.97□□□□□ -1.29
CCDC38-204ENST00000546816 TEPPQ6URK8 271 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 RCBTB1Q8NDN9 531 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 ANAPC16Q96DE5 110 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 CLIC6Q96NY7 704 aa6.97□□□□□ -1.29
CCDC38-204ENST00000546816 COA3Q9Y2R0 106 aaPredicted RBP6.97□□□□□ -1.29
CCDC38-204ENST00000546816 H7BY64 318 aa6.96□□□□□ -1.3
CCDC38-204ENST00000546816 CYR61O00622 381 aa6.96□□□□□ -1.3
CCDC38-204ENST00000546816 MEFVO15553 781 aaPredicted RBP6.96□□□□□ -1.3
CCDC38-204ENST00000546816 MYO1BO43795 1136 aa6.96□□□□□ -1.3
CCDC38-204ENST00000546816 CIR1Q86X95 450 aaPredicted RBP6.96□□□□□ -1.3
CCDC38-204ENST00000546816 CDK5RAP1Q96SZ6 601 aaKnown RBP6.96□□□□□ -1.3
CCDC38-204ENST00000546816 ZNF747Q9BV97 191 aa6.96□□□□□ -1.3
CCDC38-204ENST00000546816 PCDHB4Q9Y5E5 795 aa6.96□□□□□ -1.3
CCDC38-204ENST00000546816 CYP7B1O75881 506 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 ITGAVP06756 1048 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 SNRPB2P08579 225 aaKnown RBP6.95□□□□□ -1.3
CCDC38-204ENST00000546816 ECI1P42126 302 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 HMGA2P52926 109 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 ZNF227Q86WZ6 799 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 TMEM209Q96SK2 561 aa6.95□□□□□ -1.3
CCDC38-204ENST00000546816 PATE3B3GLJ2 98 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 LCP1P13796 627 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
CCDC38-204ENST00000546816 LSAMPQ13449 338 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 R3HDM1Q15032 1099 aaKnown RBP6.94□□□□□ -1.3
CCDC38-204ENST00000546816 SF1Q15637 639 aaKnown RBP6.94□□□□□ -1.3
CCDC38-204ENST00000546816 DENND5AQ6IQ26 1287 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 ARHGEF18Q6ZSZ5 1173 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 KLHL36Q8N4N3 616 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
CCDC38-204ENST00000546816 PTPN18Q99952 460 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 HSPBP1Q9NZL4 362 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 CROTQ9UKG9 612 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
CCDC38-204ENST00000546816 CPP00450 1065 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 COL6A1P12109 1028 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 LTBRP36941 435 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 PRSS53Q2L4Q9 553 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 ZNF585AQ6P3V2 769 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 WRNIP1Q96S55 665 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 MRIQ9BWK5 157 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 VPS11Q9H270 941 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 PCDHA2Q9Y5H9 948 aa6.93□□□□□ -1.3
CCDC38-204ENST00000546816 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
CCDC38-204ENST00000546816 FZD7O75084 574 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 CAPNS1P04632 268 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 GFRA1P56159 465 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms