RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 C17orf53Q8N3J3 647 aaPredicted RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 GLG1Q92896 1179 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 DHTKD1Q96HY7 919 aaPredicted RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 FAM81BQ96LP2 452 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 HTATIP2Q9BUP3 242 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 KRIT1O00522 736 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 TROVE2P10155 538 aaKnown RBP eCLIP11.37□□□□□ -0.59
SSH1-203ENST00000546433 GAP43P17677 238 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 TMOD1P28289 359 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 NDUFA8P51970 172 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 ZNF131P52739 623 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 PCDHA4Q9UN74 947 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 RABGAP1Q9Y3P9 1069 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 BTBD18B2RXH4 712 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 STAM2O75886 525 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 ZWINTO95229 277 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 TBC1D8O95759 1140 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 POLR2BP30876 1174 aaKnown RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 CTNNA1P35221 906 aaKnown RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 BPIFB4P59827 614 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 FDX1P10109 184 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 MAN1A1P33908 653 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 NOGQ13253 232 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 PHLDB2Q86SQ0 1253 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 TBC1D16Q8TBP0 767 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 MED4Q9NPJ6 270 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 KCNK3O14649 394 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 PTGDRQ13258 359 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 XKR9Q5GH70 373 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 SLFN13Q68D06 897 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 PLA2G4DQ86XP0 818 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 PRDM5Q9NQX1 630 aaPredicted RBP11.37□□□□□ -0.59
SSH1-203ENST00000546433 SLC12A2P55011 1212 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 ADAM9Q13443 819 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 FANCLQ9NW38 375 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 USH1CQ9Y6N9 552 aa11.37□□□□□ -0.59
SSH1-203ENST00000546433 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 ANKRD20A3Q5VUR7 823 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 GPT2Q8TD30 523 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 MRRFQ96E11 262 aaKnown RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 PSMB7Q99436 277 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 DBNLQ9UJU6 430 aaKnown RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L15C9J2P7 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L13C9JLJ4 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L11C9JVI0 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L18D6R9N7 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L22D6RA61 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L17D6RBQ6 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L19D6RCP7 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L20D6RJB6 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 STX2P32856 288 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 PCK1P35558 622 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L24Q0WX57 530 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 MAP3K21Q5TCX8 1036 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 TRIM11Q96F44 468 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 AMNQ9BXJ7 453 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 PFDN4Q9NQP4 134 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 NRBP2Q9NSY0 501 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 EIF3CLB5ME19 914 aaKnown RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 CUL4AQ13619 759 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 KRT81Q14533 505 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 CASC4Q6P4E1 433 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 EIF3CQ99613 913 aaKnown RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 ACTN1P12814 892 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 CCND2P30279 289 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 FSTL1Q12841 308 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 ARHGEF2Q92974 986 aaKnown RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 KRT12Q99456 494 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 NACA2Q9H009 215 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
SSH1-203ENST00000546433 EPN1Q9Y6I3 576 aaPredicted RBP11.36□□□□□ -0.59
SSH1-203ENST00000546433 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 MYL3P08590 195 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 PHKA1P46020 1223 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 IRX4P78413 519 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 CAMKK2Q96RR4 588 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 MMP19Q99542 508 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 ATP8B1O43520 1251 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms