RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ZNF384Q8TF68 577 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 PYM1Q9BRP8 204 aaKnown RBP10.79□□□□□ -0.68
TRAF1-203ENST00000546084 UBXN6Q9BZV1 441 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 COL5A2P05997 1499 aaPredicted RBP10.79□□□□□ -0.68
TRAF1-203ENST00000546084 EBAG9O00559 213 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 CETN3O15182 167 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 GGCXP38435 758 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 LIG3P49916 1009 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 TRIM14Q14142 442 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 TEKT1Q969V4 418 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 SHTN1A0MZ66 631 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 MYMKA6NI61 221 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 CCDC169A6NNP5 214 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 MMP10P09238 476 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 CHRNA5P30532 468 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 EP400NLQ6ZTU2 488 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 SHISA4Q96DD7 197 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 RAB21Q9UL25 225 aa10.79□□□□□ -0.68
TRAF1-203ENST00000546084 UTRNP46939 3433 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 HSF2BPO75031 334 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 GH2P01242 217 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 KIF11P52732 1056 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 SFMBT2Q5VUG0 894 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 MRC1P22897 1456 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 SPATA31A1Q5TZJ5 1347 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 CCNE1P24864 410 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 CDKAL1Q5VV42 579 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 FBXO33Q7Z6M2 555 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 ADGRF4Q8IZF3 695 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 OGFOD1Q8N543 542 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 PPM1EQ8WY54 764 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 DNAJC17Q9NVM6 304 aaKnown RBP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 BARHL2Q9NY43 387 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 DNM3Q9UQ16 869 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 ABCC6O95255 1503 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 E2F4Q16254 413 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 LRRC31Q6UY01 552 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 BCAS4Q8TDM0 211 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 BICD1Q96G01 975 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 MTRQ99707 1265 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 IKZF4Q9H2S9 585 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 PPANQ9NQ55 473 aaKnown RBP10.78□□□□□ -0.68
TRAF1-203ENST00000546084 GJA3Q9Y6H8 435 aa10.78□□□□□ -0.68
TRAF1-203ENST00000546084 KIAA0754O94854 1291 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 MNAT1P51948 309 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 USP14P54578 494 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 CSRNP1Q96S65 589 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 QTRT2Q9H974 415 aaKnown RBP10.77□□□□□ -0.69
TRAF1-203ENST00000546084 EPB41L5Q9HCM4 733 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 MAD2L2Q9UI95 211 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 GOLGA8IPA6NC78 632 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 GOLGA8JA6NMD2 632 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 PPIP5K2O43314 1243 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 EXOC3O60645 756 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 GFPT2O94808 682 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 MAGEA9P43362 315 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 ASIC2Q16515 512 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 CFAP58Q5T655 872 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 RCSD1Q6JBY9 416 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 CLEC4GQ6UXB4 293 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 VPS36Q86VN1 386 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 ZFPM1Q8IX07 1006 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 COG1Q8WTW3 980 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 NOX5Q96PH1 765 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 MYCBPQ99417 103 aaPredicted RBP10.77□□□□□ -0.69
TRAF1-203ENST00000546084 POLLQ9UGP5 575 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 JRKLQ9Y4A0 524 aa10.77□□□□□ -0.69
TRAF1-203ENST00000546084 LGALS16A8MUM7 142 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PPEF1O14829 653 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 EEF2P13639 858 aaKnown RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ARHGAP25P42331 645 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 VAV2P52735 878 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ZNF746Q6NUN9 644 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 GJB7Q6PEY0 223 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ELOA2Q8IYF1 753 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SH2D3CQ8N5H7 860 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ERMNQ8TAM6 284 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SELENOOQ9BVL4 669 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 FLT1P17948 1338 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 N4BP2Q86UW6 1770 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 STXBP3O00186 592 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SEMA3EO15041 775 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PPFIA4O75335 1185 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 APTXQ7Z2E3 356 aaKnown RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 CYP2W1Q8TAV3 490 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ZNF668Q96K58 619 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PAIP2Q9BPZ3 127 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms