RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TTLL4Q14679 1199 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 PRR16Q569H4 304 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 ATL3Q6DD88 541 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 TAPT1Q6NXT6 567 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 LENG9Q96B70 501 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
PAAF1-216ENST00000546039 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
PAAF1-216ENST00000546039 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 WNT7AO00755 349 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 TBX3O15119 743 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 NKRFO15226 690 aaKnown RBP eCLIP12.2□□□□□ -0.46
PAAF1-216ENST00000546039 SEPT4O43236 478 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 SLC37A4O43826 429 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 AKR1A1P14550 325 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 MCM7P33993 719 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 TRIM32Q13049 653 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 IQSEC1Q6DN90 963 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 GIMAP8Q8ND71 665 aaPredicted RBP12.2□□□□□ -0.46
PAAF1-216ENST00000546039 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 CYP2W1Q8TAV3 490 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
PAAF1-216ENST00000546039 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
PAAF1-216ENST00000546039 KCNH7Q9NS40 1196 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 FAM184BQ9ULE4 1060 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 CEP131Q9UPN4 1083 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
PAAF1-216ENST00000546039 NFASCO94856 1347 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ARID2Q68CP9 1835 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 LAD1O00515 517 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 TNFAIP2Q03169 654 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 NEDD9Q14511 834 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 NBR1Q14596 966 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ZNF174Q15697 407 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 CALCRLQ16602 461 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 FAM173BQ6P4H8 233 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ETNPPLQ8TBG4 499 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 FAM20AQ96MK3 541 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 ZNF577Q9BSK1 485 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 AGO4Q9HCK5 861 aaKnown RBP12.19□□□□□ -0.46
PAAF1-216ENST00000546039 HMX1Q9NP08 348 aaPredicted RBP12.19□□□□□ -0.46
PAAF1-216ENST00000546039 KCNMB3Q9NPA1 279 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 PDGFCQ9NRA1 345 aa12.19□□□□□ -0.46
PAAF1-216ENST00000546039 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 MSH4O15457 936 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 MARCH6O60337 910 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 MSCO60682 206 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 ARIH2O95376 493 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 ARP10275 920 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 TXNP10599 105 aaKnown RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 KCNA2P16389 499 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 UBA1P22314 1058 aaKnown RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 CNGA1P29973 690 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 CCND3P30281 292 aaPredicted RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 SLFN12Q8IYM2 578 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 USP28Q96RU2 1077 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 RIT2Q99578 217 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 SDF4Q9BRK5 362 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 CFAP45Q9UL16 551 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
PAAF1-216ENST00000546039 SCN10AQ9Y5Y9 1956 aa12.18□□□□□ -0.46
PAAF1-216ENST00000546039 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 GAS7O60861 476 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 DUSP11O75319 330 aaKnown RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 YEATS4O95619 227 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 GGPS1O95749 300 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 GH1P01241 217 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 RARBP10826 455 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 SMPD1P17405 629 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 PRPHP41219 470 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 KRT85P78386 507 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 PTGDRQ13258 359 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms