RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 BLIDQ8IZY5 108 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 RMDN3Q96TC7 470 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 TINF2Q9BSI4 451 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 PXMP2Q9NR77 195 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 BIN2Q9UBW5 565 aaPredicted RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 EDIL3O43854 480 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 KIF20AO95235 890 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 MMP1P03956 469 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 XBP1P17861 261 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 FOSBP53539 338 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 TRIM32Q13049 653 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 TRMT44Q8IYL2 757 aaKnown RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 NSUN6Q8TEA1 469 aaKnown RBP11.75□□□□□ -0.53
LINC00939-203ENST00000545784 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 C8orf76Q96K31 380 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 MYH6P13533 1939 aa11.75□□□□□ -0.53
LINC00939-203ENST00000545784 SYNGAP1Q96PV0 1343 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 GRK4P32298 578 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 GUCY1B3Q02153 619 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 STX1AQ16623 288 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 IL31RAQ8NI17 732 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ZNFX1Q9P2E3 1918 aaKnown RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 CENPFP49454 3210 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ASB14A6NK59 587 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 NR3C2P08235 984 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 CYP2C19P33261 490 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 RESTQ13127 1097 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 PGM5Q15124 567 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ARHGEF16Q5VV41 709 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 ARMCX2Q7L311 632 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 REXO1Q8N1G1 1221 aaKnown RBP11.74□□□□□ -0.53
LINC00939-203ENST00000545784 SLAIN1Q8ND83 568 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
LINC00939-203ENST00000545784 LCTP09848 1927 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 BTBD18B2RXH4 712 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
LINC00939-203ENST00000545784 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
LINC00939-203ENST00000545784 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
LINC00939-203ENST00000545784 NR5A1Q13285 461 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 AP3B2Q13367 1082 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
LINC00939-203ENST00000545784 CCDC112Q8NEF3 446 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
LINC00939-203ENST00000545784 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 NR1I2O75469 434 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 RGS20O76081 388 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 HMGCRP04035 888 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 TNNT1P13805 278 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 SREBF1P36956 1147 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 UBXN2AP68543 259 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 TRIM29Q14134 588 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 INHAP05111 366 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 ZNF865P0CJ78 1059 aaPredicted RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 KRT2P35908 639 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 MFSD14CQ5VZR4 134 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 PCNX4Q63HM2 1172 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 TAPT1Q6NXT6 567 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 DIS3L2Q8IYB7 885 aaKnown RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 ARMC5Q96C12 935 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 DNAJC25Q9H1X3 360 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
LINC00939-203ENST00000545784 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
LINC00939-203ENST00000545784 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
LINC00939-203ENST00000545784 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 EIF3JO75822 258 aaKnown RBP11.71□□□□□ -0.53
LINC00939-203ENST00000545784 CYP3A4P08684 503 aa11.71□□□□□ -0.53
LINC00939-203ENST00000545784 CYBAP13498 195 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms