RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 MFSD10Q14728 455 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 GRIN2CQ14957 1233 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 GDF6Q6KF10 455 aaPredicted RBP22.92■■□□□ 1.26
CHD4-213ENST00000545584 MAFAQ8NHW3 353 aaPredicted RBP22.92■■□□□ 1.26
CHD4-213ENST00000545584 NEK1Q96PY6 1258 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 FRMPD4Q14CM0 1322 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 SORBS3O60504 671 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 ZNF286BP0CG31 522 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 KIAA0753Q2KHM9 967 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 SGMS1Q86VZ5 419 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 RAB11FIP4Q86YS3 637 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 CMTR1Q8N1G2 835 aaKnown RBP22.91■■□□□ 1.26
CHD4-213ENST00000545584 FANCBQ8NB91 859 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 CCDC136Q96JN2 1154 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 FTOQ9C0B1 505 aaKnown RBP eCLIP22.91■■□□□ 1.26
CHD4-213ENST00000545584 HDAC6Q9UBN7 1215 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 GTF2IRD1Q9UHL9 959 aa22.91■■□□□ 1.26
CHD4-213ENST00000545584 PIK3CDO00329 1044 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 HOXD8P13378 290 aaPredicted RBP22.9■■□□□ 1.26
CHD4-213ENST00000545584 SP2Q02086 613 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 HSDL1Q3SXM5 330 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 USP17L6PQ6QN14 398 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 MICU3Q86XE3 530 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 AFAP1L1Q8TED9 768 aa22.9■■□□□ 1.26
CHD4-213ENST00000545584 DLL1O00548 723 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 NOP56O00567 594 aaKnown RBP22.89■■□□□ 1.25
CHD4-213ENST00000545584 ICAM3P32942 547 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 MRPS9P82933 396 aaKnown RBP22.89■■□□□ 1.25
CHD4-213ENST00000545584 COL9A3Q14050 684 aaPredicted RBP22.89■■□□□ 1.25
CHD4-213ENST00000545584 NEDD9Q14511 834 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 KRT32Q14532 448 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 XRRA1Q6P2D8 792 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 DHX32Q7L7V1 743 aaKnown RBP22.89■■□□□ 1.25
CHD4-213ENST00000545584 CCDC82Q8N4S0 544 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 GPKOWQ92917 476 aaPredicted RBP eCLIP22.89■■□□□ 1.25
CHD4-213ENST00000545584 INPP4AQ96PE3 977 aaPredicted RBP22.89■■□□□ 1.25
CHD4-213ENST00000545584 PSTPIP2Q9H939 334 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 SLC28A3Q9HAS3 691 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 RTEL1Q9NZ71 1219 aa22.89■■□□□ 1.25
CHD4-213ENST00000545584 HAS3O00219 553 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 MEIS2O14770 477 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 FIBPO43427 364 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 ATP2A2P16615 1042 aaKnown RBP22.88■■□□□ 1.25
CHD4-213ENST00000545584 PCNX4Q63HM2 1172 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 TMTC3Q6ZXV5 915 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.88■■□□□ 1.25
CHD4-213ENST00000545584 VWCEQ96DN2 955 aa22.88■■□□□ 1.25
CHD4-213ENST00000545584 GAS2L1Q99501 681 aaPredicted RBP22.88■■□□□ 1.25
CHD4-213ENST00000545584 RBM28Q9NW13 759 aaKnown RBP22.88■■□□□ 1.25
CHD4-213ENST00000545584 SPATA31C2B4DYI2 1134 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 PARNO95453 639 aaKnown RBP22.87■■□□□ 1.25
CHD4-213ENST00000545584 SELPP16109 830 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 TSGA10IPQ3SY00 556 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 NLRX1Q86UT6 975 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 NKX2-4Q9H2Z4 354 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 SCN5AQ14524 2016 aa22.87■■□□□ 1.25
CHD4-213ENST00000545584 TANC1Q9C0D5 1861 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 HMGB1P09429 215 aaKnown RBP22.86■■□□□ 1.25
CHD4-213ENST00000545584 PTK7Q13308 1070 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 APOA5Q6Q788 366 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 METTL7BQ6UX53 244 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 LRRC8DQ7L1W4 858 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 SLC9A7Q96T83 725 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 PCDHA11Q9Y5I1 949 aa22.86■■□□□ 1.25
CHD4-213ENST00000545584 TRIP12Q14669 1992 aaPredicted RBP22.85■■□□□ 1.25
CHD4-213ENST00000545584 hCG_1642624A0A1W2PR95 340 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 SPDYE3A6NKU9 549 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 H3BRB1 525 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 ZBTB43O43298 467 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 RABGGTBP53611 331 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 EXOSC10Q01780 885 aaKnown RBP22.85■■□□□ 1.25
CHD4-213ENST00000545584 RBL2Q08999 1139 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 CYFIP1Q7L576 1253 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 HEATR3Q7Z4Q2 680 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 RASEFQ8IZ41 740 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 TCEANC2Q96MN5 208 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 CTAGE1Q96RT6 745 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 C16orf70Q9BSU1 422 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 USP26Q9BXU7 913 aa22.85■■□□□ 1.25
CHD4-213ENST00000545584 TUT1Q9H6E5 874 aaKnown RBP22.85■■□□□ 1.25
CHD4-213ENST00000545584 YBX2Q9Y2T7 364 aaKnown RBP22.85■■□□□ 1.25
CHD4-213ENST00000545584 BAIAP3O94812 1187 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 LGALS2P05162 132 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 CKBP12277 381 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 FGD1P98174 961 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 RTN1Q16799 776 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 GIMAP8Q8ND71 665 aaPredicted RBP22.84■■□□□ 1.25
CHD4-213ENST00000545584 PHOSPHO2Q8TCD6 241 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 DHX38Q92620 1227 aaKnown RBP22.84■■□□□ 1.25
CHD4-213ENST00000545584 CDHR1Q96JP9 859 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 SENP7Q9BQF6 1050 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 PRDM12Q9H4Q4 367 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 EHMT1Q9H9B1 1298 aa22.84■■□□□ 1.25
CHD4-213ENST00000545584 KCNJ6P48051 423 aa22.83■■□□□ 1.25
CHD4-213ENST00000545584 SEMA3FQ13275 785 aa22.83■■□□□ 1.25
CHD4-213ENST00000545584 ADCK5Q3MIX3 580 aa22.83■■□□□ 1.25
CHD4-213ENST00000545584 PPP2R2DQ66LE6 453 aa22.83■■□□□ 1.25
CHD4-213ENST00000545584 MYO9BQ13459 2157 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 GBF1Q92538 1859 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 C17orf102A2RUQ5 167 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms