RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 TCEAL5Q5H9L2 206 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 ANKS1AQ92625 1134 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 RMDN3Q96TC7 470 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 MICAL3Q7RTP6 2002 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 RSPH10B2B2RC85 870 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 NR3C2P08235 984 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 RSPH10BP0C881 870 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 NT5C2P49902 561 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 GPM6BQ13491 265 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 HERC4Q5GLZ8 1057 aaPredicted RBP17.25■□□□□ 0.35
RTN3-214ENST00000545432 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 FBXO11Q86XK2 927 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 UIMC1Q96RL1 719 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 C16orf70Q9BSU1 422 aa17.25■□□□□ 0.35
RTN3-214ENST00000545432 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
RTN3-214ENST00000545432 NSUN3Q9H649 340 aaKnown RBP17.25■□□□□ 0.35
RTN3-214ENST00000545432 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
RTN3-214ENST00000545432 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 CAND2O75155 1236 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 LINC00271P0C7V0 271 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 IRS1P35568 1242 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
RTN3-214ENST00000545432 USH1GQ495M9 461 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 HFE2Q6ZVN8 426 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 BMP8AQ7Z5Y6 402 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 MYOCDQ8IZQ8 938 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
RTN3-214ENST00000545432 TECTAO75443 2155 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 OPLAHO14841 1288 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 TGFB3P10600 412 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 MX1P20591 662 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 KCNV1Q6PIU1 500 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 SNX27Q96L92 541 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 MFSD14AQ96MC6 490 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
RTN3-214ENST00000545432 KIAA1217Q5T5P2 1943 aa17.23■□□□□ 0.35
RTN3-214ENST00000545432 RB1P06400 928 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 HSD17B4P51659 736 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
RTN3-214ENST00000545432 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 ADGRF4Q8IZF3 695 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 SEPT8Q92599 483 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 OSBPL7Q9BZF2 842 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
RTN3-214ENST00000545432 THPOP40225 353 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 FAM26DQ5JW98 314 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 YME1L1Q96TA2 773 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
RTN3-214ENST00000545432 MBTPS2O43462 519 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
RTN3-214ENST00000545432 ADAM17P78536 824 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 SP2Q02086 613 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 EDAQ92838 391 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 CLP1Q92989 425 aaKnown RBP17.2■□□□□ 0.34
RTN3-214ENST00000545432 RNPEPQ9H4A4 650 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
RTN3-214ENST00000545432 RC3H2Q9HBD1 1191 aaKnown RBP17.2■□□□□ 0.34
RTN3-214ENST00000545432 C17orf102A2RUQ5 167 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 BMPR1AP36894 532 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 HYAL1Q12794 435 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 PNMA1Q8ND90 353 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 APBB2Q92870 758 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 SPATA33Q96N06 139 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
RTN3-214ENST00000545432 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
RTN3-214ENST00000545432 CLDND1Q9NY35 253 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms