RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 H2AFVQ71UI9 128 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 WDR17Q8IZU2 1322 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 SCG2P13521 617 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 DSTYKQ6XUX3 929 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 PRDM5Q9NQX1 630 aaPredicted RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 ZMYM6O95789 1325 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 MYL3P08590 195 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 KPNA2P52292 529 aaKnown RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 CD58P19256 250 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 NCLNQ969V3 563 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 LUC7L3O95232 432 aaKnown RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 ZSCAN26Q16670 478 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 SYMPKQ92797 1274 aaKnown RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 GTPBP10A4D1E9 387 aaKnown RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 RAP1GDS1P52306 607 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 CDO1Q16878 200 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 ZNF827Q17R98 1081 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 ANO4Q32M45 955 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 PDCD6IPQ8WUM4 868 aaKnown RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 ZNF215Q9UL58 517 aaPredicted RBP21.68■■□□□ 1.06
BPTF-208ENST00000544778 CLIC2O15247 247 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 SRGAP2CP0DJJ0 459 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 NDUFAF2Q8N183 169 aa21.68■■□□□ 1.06
BPTF-208ENST00000544778 CHEK2O96017 543 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 PSMC2P35998 433 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 ZBTB17Q13105 803 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 HSP90AA5PQ58FG0 334 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 ZC3H12BQ5HYM0 836 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 FASTKD5Q7L8L6 764 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 ABTB1Q969K4 478 aaPredicted RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 CNOT6LQ96LI5 555 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 CLIC6Q96NY7 704 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 PPARGP37231 505 aaPredicted RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 SKIV2LQ15477 1246 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 PPEF1O14829 653 aaPredicted RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 SH3BGRP55822 239 aaPredicted RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 OR6B2Q6IFH4 312 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 LRRD1A4D1F6 860 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 DRP2Q13474 957 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 TRIM42Q8IWZ5 723 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 BCAS4Q8TDM0 211 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 ADD3Q9UEY8 706 aaKnown RBP21.67■■□□□ 1.06
BPTF-208ENST00000544778 LIG3P49916 1009 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 MAP3K1Q13233 1512 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 NEMP1O14524 444 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 SGSM2O43147 1006 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 TRAPPC10P48553 1259 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 NRBF2Q96F24 287 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
BPTF-208ENST00000544778 PRPSAP2O60256 369 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 ACCSQ96QU6 501 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 PTGDRQ13258 359 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 EDC3Q96F86 508 aaKnown RBP21.66■■□□□ 1.06
BPTF-208ENST00000544778 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 USP19O94966 1318 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 SLC8A1P32418 973 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 PTK2BQ14289 1009 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 CEP170P1Q96L14 293 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 CAPN11Q9UMQ6 739 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 CIITAP33076 1130 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 TCP11X2Q5H9J9 407 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 KIAA1468Q9P260 1216 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 PPP2R2CQ9Y2T4 447 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 ZBTB7BO15156 539 aaPredicted RBP21.66■■□□□ 1.06
BPTF-208ENST00000544778 IFNA8P32881 189 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 SLC9A5Q14940 896 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 MTERF2Q49AM1 385 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 TRIP13Q15645 432 aaPredicted RBP21.66■■□□□ 1.06
BPTF-208ENST00000544778 DNAJC24Q6P3W2 148 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 SMAP1Q8IYB5 467 aaPredicted RBP21.66■■□□□ 1.06
BPTF-208ENST00000544778 TRIML1Q8N9V2 468 aa21.66■■□□□ 1.06
BPTF-208ENST00000544778 HLA-DPA1P20036 260 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 HADHAP40939 763 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 TMED1Q13445 227 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 SLC17A8Q8NDX2 589 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 TSR3Q9UJK0 312 aaKnown RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 EIF2AK4Q9P2K8 1649 aaKnown RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 MAFGO15525 162 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 KRT80Q6KB66 452 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 TRIM11Q96F44 468 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 JPH2Q9BR39 696 aaPredicted RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 FAM26FQ5R3K3 315 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 ZMAT2Q96NC0 199 aaKnown RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 MEIS1O00470 390 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 CACNB1Q02641 598 aaPredicted RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 ME3Q16798 604 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 MAML1Q92585 1016 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 PLS3P13797 630 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 FANCBQ8NB91 859 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 MYRIPQ8NFW9 859 aa21.65■■□□□ 1.06
BPTF-208ENST00000544778 ARHGEF1Q92888 912 aaKnown RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 UBE2TQ9NPD8 197 aaPredicted RBP21.65■■□□□ 1.06
BPTF-208ENST00000544778 ARL13BQ3SXY8 428 aa21.64■■□□□ 1.06
BPTF-208ENST00000544778 VCPP55072 806 aaKnown RBP21.64■■□□□ 1.05
BPTF-208ENST00000544778 TNKSO95271 1327 aa21.64■■□□□ 1.05
BPTF-208ENST00000544778 ANP32DO95626 131 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms