RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
DDX55-212ENST00000544738 HFE2Q6ZVN8 426 aa18.83■□□□□ 0.6
DDX55-212ENST00000544738 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
DDX55-212ENST00000544738 AMNQ9BXJ7 453 aa18.83■□□□□ 0.6
DDX55-212ENST00000544738 E7EWF7 191 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 KPNA6O60684 536 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 PTPN11Q06124 597 aaPredicted RBP18.82■□□□□ 0.6
DDX55-212ENST00000544738 GPNMBQ14956 572 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 CCDC155Q8N6L0 562 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 IWS1Q96ST2 819 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 PHOX2BQ99453 314 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
DDX55-212ENST00000544738 PALM3A6NDB9 673 aaPredicted RBP18.81■□□□□ 0.6
DDX55-212ENST00000544738 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 TXNP10599 105 aaKnown RBP18.81■□□□□ 0.6
DDX55-212ENST00000544738 WTAPQ15007 396 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 CNKSR3Q6P9H4 555 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 SAMD3Q8N6K7 520 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 NEK9Q8TD19 979 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 SYTL5Q8TDW5 730 aaPredicted RBP18.81■□□□□ 0.6
DDX55-212ENST00000544738 AFAP1L1Q8TED9 768 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 COPS5Q92905 334 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 MFSD14AQ96MC6 490 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 C17orf80Q9BSJ5 609 aa18.81■□□□□ 0.6
DDX55-212ENST00000544738 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
DDX55-212ENST00000544738 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
DDX55-212ENST00000544738 ZBTB5O15062 677 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 SELPP16109 830 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 TCTN1Q2MV58 587 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 CAGE1Q8TC20 777 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 MTMR8Q96EF0 704 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 TAAR1Q96RJ0 339 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 PCDHA1Q9Y5I3 950 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 CFAP54Q96N23 3096 aa18.8■□□□□ 0.6
DDX55-212ENST00000544738 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
DDX55-212ENST00000544738 ABHD14A-ACY1A0A1B0GW23 586 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 A6NJR5 290 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 ZP2Q05996 745 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 IKBKEQ14164 716 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 GRM4Q14833 912 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 STXBP2Q15833 593 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
DDX55-212ENST00000544738 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 UPF3BQ9BZI7 483 aaKnown RBP18.79■□□□□ 0.6
DDX55-212ENST00000544738 FAM50BQ9Y247 325 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 RBM8AQ9Y5S9 174 aaKnown RBP18.79■□□□□ 0.6
DDX55-212ENST00000544738 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
DDX55-212ENST00000544738 MYH6P13533 1939 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 NBNO60934 754 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 CFBP00751 764 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 GHRHRQ02643 423 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 PTPROQ16827 1216 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 ARHGEF16Q5VV41 709 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
DDX55-212ENST00000544738 CATIPQ7Z7H3 387 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 RIOX1Q9H6W3 641 aa18.78■□□□□ 0.6
DDX55-212ENST00000544738 HSD17B4P51659 736 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 TROAPQ12815 778 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 IGDCC4Q8TDY8 1250 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 COL20A1Q9P218 1284 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 PRKAG3Q9UGI9 489 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 INSL6Q9Y581 213 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
DDX55-212ENST00000544738 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
DDX55-212ENST00000544738 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
DDX55-212ENST00000544738 PARNO95453 639 aaKnown RBP18.76■□□□□ 0.59
DDX55-212ENST00000544738 CXCL10P02778 98 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 NR3C2P08235 984 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 CKBP12277 381 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 TCEAL5Q5H9L2 206 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 SEPT14Q6ZU15 432 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
DDX55-212ENST00000544738 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 ADHFE1Q8IWW8 467 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 MB21D2Q8IYB1 491 aaPredicted RBP18.76■□□□□ 0.59
DDX55-212ENST00000544738 TMTC2Q8N394 836 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 DHX38Q92620 1227 aaKnown RBP18.76■□□□□ 0.59
DDX55-212ENST00000544738 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 MAP3K14Q99558 947 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 PXMP2Q9NR77 195 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
DDX55-212ENST00000544738 PTPRSQ13332 1948 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 OPLAHO14841 1288 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 ST18O60284 1047 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
DDX55-212ENST00000544738 EFCAB14O75071 495 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 GH1P01241 217 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 EIF2AK2P19525 551 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms