RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MXD3Q9BW11 206 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 USP40Q9NVE5 1235 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 NYAP2Q9P242 653 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 SYNPO2Q9UMS6 1093 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 SBF2Q86WG5 1849 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 FRMPD2Q68DX3 1309 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-223ENST00000544669 G3V3G9 751 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 IFI16Q16666 785 aaKnown RBP14.42□□□□□ -0.1
CPSF7-223ENST00000544669 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 CCDC181Q5TID7 509 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 DYMQ7RTS9 669 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 FMNL3Q8IVF7 1028 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 LRRC15Q8TF66 581 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 CCDC102AQ96A19 550 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 GJD4Q96KN9 370 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-223ENST00000544669 MMS19Q96T76 1030 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 GPCPD1Q9NPB8 672 aa14.42□□□□□ -0.1
CPSF7-223ENST00000544669 TRAF5O00463 557 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 SLC37A4O43826 429 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 RPS6KA5O75582 802 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 TDP2O95551 362 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ABL1P00519 1130 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 AKR1B1P15121 316 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 SFMBT2Q5VUG0 894 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 LRRC55Q6ZSA7 311 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 RRAGAQ7L523 313 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 NOA1Q8NC60 698 aaKnown RBP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 COG1Q8WTW3 980 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 TAF1LQ8IZX4 1826 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ATP8B3O60423 1300 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ENC1O14682 589 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 CETN3O15182 167 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 NPR1P16066 1061 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ACTN2P35609 894 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 EIF4A3P38919 411 aaKnown RBP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 EPS15P42566 896 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 COASYQ13057 564 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 PICALMQ13492 652 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 CCNI2Q6ZMN8 369 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 PTF1AQ7RTS3 328 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 PODNQ7Z5L7 613 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 FAM20AQ96MK3 541 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 MBOAT7Q96N66 472 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 LACRTQ9GZZ8 138 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 VPS18Q9P253 973 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
CPSF7-223ENST00000544669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPSF7-223ENST00000544669 MACROD2A1Z1Q3 448 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 ERICH4A6NGS2 130 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 RPL13P26373 211 aaKnown RBP14.4□□□□□ -0.1
CPSF7-223ENST00000544669 CFAP221Q4G0U5 840 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 ZCWPW2Q504Y3 356 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 LRRC47Q8N1G4 583 aaKnown RBP14.4□□□□□ -0.1
CPSF7-223ENST00000544669 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 DNAJC19Q96DA6 116 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 METTL14Q9HCE5 456 aaKnown RBP14.4□□□□□ -0.1
CPSF7-223ENST00000544669 TRIM10Q9UDY6 481 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 DAAM1Q9Y4D1 1078 aa14.4□□□□□ -0.1
CPSF7-223ENST00000544669 GRID2IPA4D2P6 1211 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 POTEMA6NI47 508 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 LRRC53A6NM62 1247 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 OPA1O60313 960 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
CPSF7-223ENST00000544669 PLA2G4BP0C869 781 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 TNFRSF8P28908 595 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 EMBQ6PCB8 327 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 ZC3H3Q8IXZ2 948 aaKnown RBP14.39□□□□□ -0.11
CPSF7-223ENST00000544669 BAP1Q92560 729 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 KCNMB3Q9NPA1 279 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
CPSF7-223ENST00000544669 BAZ2BQ9UIF8 2168 aaKnown RBP14.39□□□□□ -0.11
CPSF7-223ENST00000544669 BTNL10A8MVZ5 291 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 CES2O00748 559 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 CALUO43852 315 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 SHMT1P34896 483 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 PDE6BP35913 854 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 LMAN1P49257 510 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 CYP27A1Q02318 531 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 APBA1Q02410 837 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 NNTQ13423 1086 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 ASTE1Q2TB18 679 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 Q4G0T1 1027 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-223ENST00000544669 FRMD5Q7Z6J6 570 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 TRIM59Q8IWR1 403 aa14.38□□□□□ -0.11
CPSF7-223ENST00000544669 HAS1Q92839 578 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms