RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 MAOBP27338 520 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 PDE3AQ14432 1141 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 ELOA3BQ3SY89 546 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 RPUSD2Q8IZ73 545 aaKnown RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 ELOA3Q8NG57 546 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 DEFB129Q9H1M3 183 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 CCDC86Q9H6F5 360 aaKnown RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 DDX56Q9NY93 547 aaKnown RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 MINPP1Q9UNW1 487 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 PLAAQ9Y263 795 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 LAS1LQ9Y4W2 734 aaKnown RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 PPP2R3BQ9Y5P8 575 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 DUOX1Q9NRD9 1551 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 SLC22A31A6NKX4 558 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 NEURL1BA8MQ27 555 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 UPK3BL1B0FP48 263 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 UPK3BL2E5RIL1 263 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 MYO1BO43795 1136 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 WDHD1O75717 1129 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 CCT4P50991 539 aaKnown RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 DLGAP5Q15398 846 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 TXNDC11Q6PKC3 985 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 KDM3BQ7LBC6 1761 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 LRRC47Q8N1G4 583 aaKnown RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 CD99L2Q8TCZ2 262 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 ZBED3Q96IU2 234 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 WNK4Q96J92 1243 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 MYD88Q99836 296 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 SPATA9Q9BWV2 254 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 ANKRD2Q9GZV1 360 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 EPN3Q9H201 632 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 OSGEPQ9NPF4 335 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 CWC25Q9NXE8 425 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-222ENST00000544585 KLF15Q9UIH9 416 aa7.65□□□□□ -1.18
CPSF7-222ENST00000544585 TAF1P21675 1872 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 MED23Q9ULK4 1368 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 LINC01387J3KSC0 135 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 IGF2BP3O00425 579 aaKnown RBP eCLIP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 USP2O75604 605 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 ECEL1O95672 775 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 DDX58O95786 925 aaKnown RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 ACRP10323 421 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 SELPP16109 830 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 MAP2K3P46734 347 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 ZYXQ15942 572 aaKnown RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 LONRF2Q1L5Z9 754 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 SLC4A8Q2Y0W8 1093 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 PLEKHG6Q3KR16 790 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 ZC3H12BQ5HYM0 836 aaKnown RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 NANOS1Q8WY41 292 aaKnown RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 METTL22Q9BUU2 404 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 CNNM2Q9H8M5 875 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 JPH1Q9HDC5 661 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-222ENST00000544585 KLHL3Q9UH77 587 aa7.64□□□□□ -1.19
CPSF7-222ENST00000544585 PRAMEF27A3QJZ7 478 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 DCDC2CA8MYV0 355 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 AGRPO00253 132 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 TNFRSF10CO14798 259 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 SUSD5O60279 629 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 SASH1O94885 1247 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 S100BP04271 92 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-222ENST00000544585 PGRP06401 933 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 FAM153BP0C7A2 387 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 CNGA1P29973 690 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 IGHMBP2P38935 993 aaKnown RBP7.63□□□□□ -1.19
CPSF7-222ENST00000544585 SLC7A5Q01650 507 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 CRHR2Q13324 411 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 LAPTM4AQ15012 233 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 SLC9C1Q4G0N8 1177 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 TMEM201Q5SNT2 666 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 HP1BP3Q5SSJ5 553 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-222ENST00000544585 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 KIAA1211LQ6NV74 962 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 CYFIP1Q7L576 1253 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 FCHSD1Q86WN1 690 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 ZNF333Q96JL9 665 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 SLC9A7Q96T83 725 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 MXD3Q9BW11 206 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 IRF2BPLQ9H1B7 796 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 PCDHB10Q9UN67 800 aa7.63□□□□□ -1.19
CPSF7-222ENST00000544585 LAMB2P55268 1798 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 ZNF804BA4D1E1 1349 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 LRRC37AA6NMS7 1700 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 H0YGN5 161 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 FSCN2O14926 492 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 ZNF862O60290 1169 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 RAG1P15918 1043 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 LIG1P18858 919 aa7.62□□□□□ -1.19
CPSF7-222ENST00000544585 PRMT2P55345 433 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms