RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CLUHP3Q96NS8 147 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 JAM3Q9BX67 310 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 MCOLN1Q9GZU1 580 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 RNF38Q9H0F5 515 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 TMX1Q9H3N1 280 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 SMOC1Q9H4F8 434 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 IPPKQ9H8X2 491 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 MAGEC2Q9UBF1 373 aaPredicted RBP3.44□□□□□ -1.86
YBX3-214ENST00000544501 MBD1Q9UIS9 605 aaPredicted RBP3.44□□□□□ -1.86
YBX3-214ENST00000544501 CADPSQ9ULU8 1353 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 N4BP3O15049 544 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 RASGRP1O95267 797 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 MED14OSP0DP75 135 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 NCAM1P13591 858 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 PFKLP17858 780 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 FBLN1P23142 703 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 IGFALSP35858 605 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 FLT3P36888 993 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 DLG4P78352 724 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 ST5P78524 1137 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 CRY1Q16526 586 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 TKFCQ3LXA3 575 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 DALRD3Q5D0E6 543 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 FGD2Q7Z6J4 655 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 MILR1Q7Z6M3 343 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 LDHDQ86WU2 507 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 ZC3H7AQ8IWR0 971 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 UHMK1Q8TAS1 419 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 PIP4K2CQ8TBX8 421 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 SLC38A3Q99624 504 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 KCNJ15Q99712 375 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 CELF4Q9BZC1 486 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 CNTD2Q9H8S5 307 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 NGRNQ9NPE2 291 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 PPARGC1AQ9UBK2 798 aaKnown RBP3.43□□□□□ -1.86
YBX3-214ENST00000544501 PALD1Q9ULE6 856 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 PCDHB4Q9Y5E5 795 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 PCDHA5Q9Y5H7 936 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 CD2APQ9Y5K6 639 aa3.43□□□□□ -1.86
YBX3-214ENST00000544501 TCRBV5S2A0A599 114 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 CCDC66A2RUB6 948 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ETV2O00321 342 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 NFIBO00712 420 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 SMARCA5O60264 1052 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 DNAJC8O75937 253 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 TSPAN15O95858 294 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 CKMP06732 381 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ASGR2P07307 311 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 TMEM253P0C7T8 217 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 KCNA6P17658 529 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 POU3F2P20265 443 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 CDR1P51861 262 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 EPHA5P54756 1037 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 LACTBP83111 547 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 ZNF200P98182 395 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 GPR19Q15760 415 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ZCCHC8Q6NZY4 707 aaKnown RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 SYDE1Q6ZW31 735 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 DDX53Q86TM3 631 aaKnown RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 AMIGO3Q86WK7 504 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ANKLE2Q86XL3 938 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 MIB1Q86YT6 1006 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 FAM126BQ8IXS8 530 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 NIM1KQ8IY84 436 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 NLGN4XQ8N0W4 816 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 TTLL11Q8NHH1 800 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 MZB1Q8WU39 189 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ALG3Q92685 438 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 SLKQ9H2G2 1235 aaPredicted RBP3.42□□□□□ -1.86
YBX3-214ENST00000544501 RXFP1Q9HBX9 757 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 PCDH18Q9HCL0 1135 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 GCM1Q9NP62 436 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 CATSPERZQ9NTU4 200 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 HSPBP1Q9NZL4 362 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 MYOTQ9UBF9 498 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ASH2LQ9UBL3 628 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 DSEQ9UL01 958 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 SIT1Q9Y3P8 196 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 HCFC2Q9Y5Z7 792 aa3.42□□□□□ -1.86
YBX3-214ENST00000544501 ZNF561-AS1K7EIQ3 104 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 IRS4O14654 1257 aaPredicted RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 NKRFO15226 690 aaKnown RBP eCLIP3.41□□□□□ -1.86
YBX3-214ENST00000544501 OPA1O60313 960 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 SRGAP2CP0DJJ0 459 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 PYGMP11217 842 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 PDE6AP16499 860 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 SDSP20132 328 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 IGFBP6P24592 240 aaPredicted RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 PMLP29590 882 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 GYS2P54840 703 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 CACNB2Q08289 660 aaPredicted RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 PKN1Q16512 942 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 TM4SF20Q53R12 229 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 EGFLAMQ63HQ2 1017 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 ABHD17CQ6PCB6 329 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 ETV3LQ6ZN32 361 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 ARHGAP36Q6ZRI8 547 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 UBE2R2Q712K3 238 aaPredicted RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 OVCH1Q7RTY7 1134 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 LRRTM3Q86VH5 581 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms