RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 CIAPIN1Q6FI81 312 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 ZNF653Q96CK0 615 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 PNMA6FA0A0J9YX94 578 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 H7C0C1 242 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 TLR3O15455 904 aaKnown RBP13.95□□□□□ -0.18
CHD4-211ENST00000544484 ATP5OP48047 213 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 P3H4Q92791 437 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 NXF1Q9UBU9 619 aaKnown RBP13.95□□□□□ -0.18
CHD4-211ENST00000544484 A6NNZ2 444 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 CCNA1P78396 465 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 TUBB8Q3ZCM7 444 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 MIS18BP1Q6P0N0 1132 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 FAM149B1Q96BN6 582 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 TDRD3Q9H7E2 651 aaKnown RBP13.95□□□□□ -0.18
CHD4-211ENST00000544484 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 USP17L5A8MUK1 530 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 ATF2P15336 505 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 MAGOHBQ96A72 148 aaKnown RBP13.95□□□□□ -0.18
CHD4-211ENST00000544484 GCNT4Q9P109 453 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
CHD4-211ENST00000544484 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 LMNB1P20700 586 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 GSDMBQ8TAX9 411 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 CPSF1Q10570 1443 aaKnown RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 SARNPP82979 210 aaKnown RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 AFAP1L2Q8N4X5 818 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 LPXNO60711 386 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 TTC19Q6DKK2 380 aaPredicted RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 MASTLQ96GX5 879 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 FTCDO95954 541 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 MARK3P27448 753 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 PCK1P35558 622 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 SNX1Q13596 522 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 UBE2TQ9NPD8 197 aaPredicted RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 CCNE1P24864 410 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 CCND2P30279 289 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 POLD4Q9HCU8 107 aa13.94□□□□□ -0.18
CHD4-211ENST00000544484 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
CHD4-211ENST00000544484 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 C7orf31Q8N865 590 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 ENOX1Q8TC92 643 aaKnown RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 KCNQ2O43526 872 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 RNF40O75150 1001 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 OSBPP22059 807 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 GABPB1Q06547 395 aaPredicted RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 PIGOQ8TEQ8 1089 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 RSRC1Q96IZ7 334 aaKnown RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 RIPOR2Q9Y4F9 1068 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 CSPG5O95196 566 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 MYCP01106 439 aaPredicted RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 CRKP46108 304 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 BPIFB4P59827 614 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 FOXP4Q8IVH2 680 aaPredicted RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHD4-211ENST00000544484 STAG1Q8WVM7 1258 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 STK38LQ9Y2H1 464 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 SEC31AO94979 1220 aaKnown RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 CDC25BP30305 580 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 MAPK4P31152 587 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 PHBP35232 272 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 MOCS3O95396 460 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 CD58P19256 250 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 CD209Q9NNX6 404 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 MKRN1Q9UHC7 482 aaKnown RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 EIF4A3P38919 411 aaKnown RBP13.93□□□□□ -0.18
CHD4-211ENST00000544484 HAUS1Q96CS2 278 aa13.93□□□□□ -0.18
CHD4-211ENST00000544484 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms