RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 MFSD5Q6N075 450 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 LRCH3Q96II8 777 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 SPATA33Q96N06 139 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 UPF3BQ9BZI7 483 aaKnown RBP21.93■■□□□ 1.1
SPPL3-208ENST00000543854 BARHL2Q9NY43 387 aa21.93■■□□□ 1.1
SPPL3-208ENST00000543854 SORBS3O60504 671 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 EIF5BO60841 1220 aaKnown RBP21.92■■□□□ 1.1
SPPL3-208ENST00000543854 ICAM3P32942 547 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 SHHQ15465 462 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 C9orf50Q5SZB4 431 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 MYSM1Q5VVJ2 828 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 TYW1BQ6NUM6 668 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 TMEM199Q8N511 208 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 KATNAL1Q9BW62 490 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 MLXIPQ9HAP2 919 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 RIC8AQ9NPQ8 531 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 TRMT13Q9NUP7 481 aaKnown RBP21.92■■□□□ 1.1
SPPL3-208ENST00000543854 RTEL1Q9NZ71 1219 aa21.92■■□□□ 1.1
SPPL3-208ENST00000543854 SPATA31C2B4DYI2 1134 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 ZNF286BP0CG31 522 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 EVCP57679 992 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 SP2Q02086 613 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 PTPN11Q06124 597 aaPredicted RBP21.91■■□□□ 1.1
SPPL3-208ENST00000543854 PPIGQ13427 754 aaKnown RBP eCLIP21.91■■□□□ 1.1
SPPL3-208ENST00000543854 PFKFB3Q16875 520 aaPredicted RBP21.91■■□□□ 1.1
SPPL3-208ENST00000543854 NLRX1Q86UT6 975 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 GLT8D2Q9H1C3 349 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 PCDHA6Q9UN73 950 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 PCDHA8Q9Y5H6 950 aa21.91■■□□□ 1.1
SPPL3-208ENST00000543854 F2P00734 622 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 SCG2P13521 617 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 PDIA3P30101 505 aaKnown RBP21.9■■□□□ 1.1
SPPL3-208ENST00000543854 CYP2C18P33260 490 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 EPHB4P54760 987 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 AKAP17AQ02040 695 aaKnown RBP21.9■■□□□ 1.1
SPPL3-208ENST00000543854 TOB2Q14106 344 aaPredicted RBP21.9■■□□□ 1.1
SPPL3-208ENST00000543854 NEDD9Q14511 834 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 HSDL1Q3SXM5 330 aa21.9■■□□□ 1.1
SPPL3-208ENST00000543854 RNPC3Q96LT9 517 aaKnown RBP21.9■■□□□ 1.1
SPPL3-208ENST00000543854 NOC4LQ9BVI4 516 aaKnown RBP21.9■■□□□ 1.1
SPPL3-208ENST00000543854 SMCO2A6NFE2 343 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 NOP56O00567 594 aaKnown RBP21.89■■□□□ 1.09
SPPL3-208ENST00000543854 HOXD8P13378 290 aaPredicted RBP21.89■■□□□ 1.09
SPPL3-208ENST00000543854 SEMA3FQ13275 785 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 METTL7BQ6UX53 244 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 CCDC12Q8WUD4 166 aaPredicted RBP21.89■■□□□ 1.09
SPPL3-208ENST00000543854 PPP1R13LQ8WUF5 828 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 KAT2BQ92831 832 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 GPRASP2Q96D09 838 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 CDHR1Q96JP9 859 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 PDRG1Q9NUG6 133 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 NOD1Q9Y239 953 aa21.89■■□□□ 1.09
SPPL3-208ENST00000543854 DOCK5Q9H7D0 1870 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 PPFIA4O75335 1185 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 FOSP01100 380 aaPredicted RBP21.88■■□□□ 1.09
SPPL3-208ENST00000543854 CYP2C9P11712 490 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 CSF2RAP15509 400 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 ANAPC15P60006 121 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 CCT2P78371 535 aaKnown RBP21.88■■□□□ 1.09
SPPL3-208ENST00000543854 AP3B2Q13367 1082 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 MFSD10Q14728 455 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 GPR153Q6NV75 609 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 SESTD1Q86VW0 696 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 PHKBQ93100 1093 aa21.88■■□□□ 1.09
SPPL3-208ENST00000543854 RNF26Q9BY78 433 aaPredicted RBP21.88■■□□□ 1.09
SPPL3-208ENST00000543854 NCOA5Q9HCD5 579 aaKnown RBP21.88■■□□□ 1.09
SPPL3-208ENST00000543854 UMODL1Q5DID0 1318 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 PRPF3O43395 683 aaKnown RBP21.87■■□□□ 1.09
SPPL3-208ENST00000543854 IFNAR1P17181 557 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 PSEN2P49810 448 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 MTMR1Q13613 665 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 KIAA0753Q2KHM9 967 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 PSRC1Q6PGN9 363 aaPredicted RBP21.87■■□□□ 1.09
SPPL3-208ENST00000543854 CYFIP1Q7L576 1253 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 C7orf31Q8N865 590 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 GIMAP8Q8ND71 665 aaPredicted RBP21.87■■□□□ 1.09
SPPL3-208ENST00000543854 SENP7Q9BQF6 1050 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 SLC26A6Q9BXS9 759 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 TANC1Q9C0D5 1861 aa21.87■■□□□ 1.09
SPPL3-208ENST00000543854 ESYT2A0FGR8 921 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 ITGB5P18084 799 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 NTRK3Q16288 839 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 ZNF274Q96GC6 653 aaPredicted RBP21.86■■□□□ 1.09
SPPL3-208ENST00000543854 PGBD1Q96JS3 809 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 ALG1Q9BT22 464 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 ANO3Q9BYT9 981 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 WNT8AQ9H1J5 351 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 UBIAD1Q9Y5Z9 338 aa21.86■■□□□ 1.09
SPPL3-208ENST00000543854 CPLX1O14810 134 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 CLK2P49760 499 aaKnown RBP21.85■■□□□ 1.09
SPPL3-208ENST00000543854 CCL23P55773 120 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 PKN1Q16512 942 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 PTGISQ16647 500 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 TRIM22Q8IYM9 498 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 CCDC148Q8NFR7 591 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.85■■□□□ 1.09
SPPL3-208ENST00000543854 IL23AQ9NPF7 189 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 GTF2IRD1Q9UHL9 959 aa21.85■■□□□ 1.09
SPPL3-208ENST00000543854 HAS3O00219 553 aa21.84■■□□□ 1.09
SPPL3-208ENST00000543854 PITPNM1O00562 1244 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms