RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 IKBKEQ14164 716 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 CELF3Q5SZQ8 465 aaKnown RBP26.29■■□□□ 1.8
CDKN3-207ENST00000543789 VSIG10LQ86VR7 867 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 SPATA33Q96N06 139 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 C1QTNF1Q9BXJ1 281 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 LMCD1Q9NZU5 365 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 PPP1R11O60927 126 aaPredicted RBP26.28■■□□□ 1.8
CDKN3-207ENST00000543789 RGS20O76081 388 aa26.28■■□□□ 1.8
CDKN3-207ENST00000543789 ZNF200P98182 395 aaPredicted RBP26.28■■□□□ 1.8
CDKN3-207ENST00000543789 SEC23AQ15436 765 aa26.28■■□□□ 1.8
CDKN3-207ENST00000543789 TCTN1Q2MV58 587 aa26.28■■□□□ 1.8
CDKN3-207ENST00000543789 TRIM71Q2Q1W2 868 aaKnown RBP26.28■■□□□ 1.8
CDKN3-207ENST00000543789 ZNF618Q5T7W0 954 aa26.28■■□□□ 1.8
CDKN3-207ENST00000543789 MAD2L2Q9UI95 211 aa26.28■■□□□ 1.8
CDKN3-207ENST00000543789 PALM3A6NDB9 673 aaPredicted RBP26.27■■□□□ 1.8
CDKN3-207ENST00000543789 TGFB3P10600 412 aa26.27■■□□□ 1.8
CDKN3-207ENST00000543789 HOXA13P31271 388 aaPredicted RBP26.27■■□□□ 1.8
CDKN3-207ENST00000543789 TRAF7Q6Q0C0 670 aa26.27■■□□□ 1.8
CDKN3-207ENST00000543789 WNT8BQ93098 351 aa26.27■■□□□ 1.8
CDKN3-207ENST00000543789 SORBS3O60504 671 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 GGPS1O95749 300 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 TRAF1Q13077 416 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 PGM5Q15124 567 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 HSDL1Q3SXM5 330 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 CYB5R4Q7L1T6 521 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 TGS1Q96RS0 853 aaKnown RBP26.26■■□□□ 1.79
CDKN3-207ENST00000543789 SUGCTQ9HAC7 445 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 TET1Q8NFU7 2136 aa26.26■■□□□ 1.79
CDKN3-207ENST00000543789 NCOR1O75376 2440 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 GCOM1H8Y6P7 765 aaPredicted RBP26.25■■□□□ 1.79
CDKN3-207ENST00000543789 LGR5O75473 907 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 POLR2MP0CAP2 368 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 ERVK-21P61565 698 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 SP2Q02086 613 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 MBTPS1Q14703 1052 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 GDPD5Q8WTR4 605 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 MLXIPQ9HAP2 919 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 MTUS1Q9ULD2 1270 aa26.25■■□□□ 1.79
CDKN3-207ENST00000543789 CCND2P30279 289 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 TRDNQ13061 729 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 HIC1Q14526 733 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 FAM117BQ6P1L5 589 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 HOMER1Q86YM7 354 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 IL31RAQ8NI17 732 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 C16orf70Q9BSU1 422 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 REV3LO60673 3130 aa26.24■■□□□ 1.79
CDKN3-207ENST00000543789 TRANK1O15050 2925 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 EMSYQ7Z589 1322 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 LINC01553A4QN01 128 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 UBA1P22314 1058 aaKnown RBP26.23■■□□□ 1.79
CDKN3-207ENST00000543789 THPOP40225 353 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 FCHSD1Q86WN1 690 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 IL25Q9H293 177 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 RIOX1Q9H6W3 641 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 TANC1Q9C0D5 1861 aa26.23■■□□□ 1.79
CDKN3-207ENST00000543789 RSPH10B2B2RC85 870 aa26.22■■□□□ 1.79
CDKN3-207ENST00000543789 RSPH10BP0C881 870 aa26.22■■□□□ 1.79
CDKN3-207ENST00000543789 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.22■■□□□ 1.79
CDKN3-207ENST00000543789 SERINC5Q86VE9 423 aa26.22■■□□□ 1.79
CDKN3-207ENST00000543789 ZFP91Q96JP5 570 aaPredicted RBP26.22■■□□□ 1.79
CDKN3-207ENST00000543789 PIGSQ96S52 555 aa26.22■■□□□ 1.79
CDKN3-207ENST00000543789 INSL6Q9Y581 213 aa26.22■■□□□ 1.79
CDKN3-207ENST00000543789 GRM4Q14833 912 aa26.21■■□□□ 1.79
CDKN3-207ENST00000543789 SLC35G1Q2M3R5 365 aa26.21■■□□□ 1.79
CDKN3-207ENST00000543789 DBF4BQ8NFT6 615 aa26.21■■□□□ 1.79
CDKN3-207ENST00000543789 GPKOWQ92917 476 aaPredicted RBP eCLIP26.21■■□□□ 1.79
CDKN3-207ENST00000543789 ATP6V0A1Q93050 837 aa26.21■■□□□ 1.79
CDKN3-207ENST00000543789 BDP1A6H8Y1 2624 aa26.21■■□□□ 1.79
CDKN3-207ENST00000543789 C17orf102A2RUQ5 167 aa26.2■■□□□ 1.78
CDKN3-207ENST00000543789 H3BRB1 525 aa26.2■■□□□ 1.78
CDKN3-207ENST00000543789 IFIT3O14879 490 aaKnown RBP26.2■■□□□ 1.78
CDKN3-207ENST00000543789 AMHP03971 560 aa26.2■■□□□ 1.78
CDKN3-207ENST00000543789 EXOC6Q8TAG9 804 aa26.2■■□□□ 1.78
CDKN3-207ENST00000543789 EPHX3Q9H6B9 360 aa26.2■■□□□ 1.78
CDKN3-207ENST00000543789 TUT1Q9H6E5 874 aaKnown RBP26.2■■□□□ 1.78
CDKN3-207ENST00000543789 U3KPZ7 1027 aaPredicted RBP26.2■■□□□ 1.78
CDKN3-207ENST00000543789 TRIP12Q14669 1992 aaPredicted RBP26.2■■□□□ 1.78
CDKN3-207ENST00000543789 TCF20Q9UGU0 1960 aaKnown RBP26.19■■□□□ 1.78
CDKN3-207ENST00000543789 PNMA6FA0A0J9YX94 578 aa26.19■■□□□ 1.78
CDKN3-207ENST00000543789 ERICH2A1L162 156 aa26.19■■□□□ 1.78
CDKN3-207ENST00000543789 RBAK-RBAKDNI3L0D1 243 aa26.19■■□□□ 1.78
CDKN3-207ENST00000543789 SMIM10L2AP0DMW4 78 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 SMIM10L2BP0DMW5 78 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 GNPTABQ3T906 1256 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 PLEKHG4Q58EX7 1191 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 MYOCDQ8IZQ8 938 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 USP26Q9BXU7 913 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 BCAS3Q9H6U6 928 aa26.18■■□□□ 1.78
CDKN3-207ENST00000543789 NOP56O00567 594 aaKnown RBP26.17■■□□□ 1.78
CDKN3-207ENST00000543789 CYTH3O43739 400 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 STAM2O75886 525 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 LGALS2P05162 132 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 HOXC8P31273 242 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 MKRN4PQ13434 485 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-207ENST00000543789 RNPEPQ9H4A4 650 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 SENP2Q9HC62 589 aa26.17■■□□□ 1.78
CDKN3-207ENST00000543789 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.16■■□□□ 1.78
CDKN3-207ENST00000543789 TREHO43280 583 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 CYP21A2P08686 494 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 ICAM3P32942 547 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms