RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 ARHGAP20Q9P2F6 1191 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 KCNG1Q9UIX4 513 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 NOVA2Q9UNW9 492 aaKnown RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 TFR2Q9UP52 801 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 PCDHGC5Q9Y5F6 944 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 ATP8B3O60423 1300 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 MYH6P13533 1939 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 TRIM49BA6NDI0 452 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 H0YGN5 161 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 SART1O43290 800 aaKnown RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 ANXA13P27216 316 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 NLRP5P59047 1200 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 TRIM28Q13263 835 aaKnown RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 BLMHQ13867 455 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 MIS18BP1Q6P0N0 1132 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 PDXDC1Q6P996 788 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 PIGWQ7Z7B1 504 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 PNMA8AQ86V59 439 aaPredicted RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 CFAP61Q8NHU2 1237 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 UBLCP1Q8WVY7 318 aaPredicted RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 ACSBG1Q96GR2 724 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 DUSP9Q99956 384 aaKnown RBP5.48□□□□□ -1.53
LMO3-229ENST00000543721 LRRC27Q9C0I9 530 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 RAB17Q9H0T7 212 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 NDST4Q9H3R1 872 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 CCDC134Q9H6E4 229 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 KBTBD4Q9NVX7 518 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 CTNNAL1Q9UBT7 734 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 TMEM59LQ9UK28 342 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 NFS1Q9Y697 457 aa5.48□□□□□ -1.53
LMO3-229ENST00000543721 CTNND1O60716 968 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 SMNDC1O75940 238 aaKnown RBP eCLIP5.47□□□□□ -1.53
LMO3-229ENST00000543721 CLTAP09496 248 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PHKG2P15735 406 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ARID4AP29374 1257 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 LTKP29376 864 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 CXCR5P32302 372 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PDE6CP51160 858 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 CMPK2Q5EBM0 449 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 RRP12Q5JTH9 1297 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 GALNT17Q6IS24 598 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 TRPM8Q7Z2W7 1104 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 KRT26Q7Z3Y9 468 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 TLCD1Q96CP7 247 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 L3MBTL3Q96JM7 780 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 RAB3IPQ96QF0 476 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 TSG101Q99816 390 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PUS3Q9BZE2 481 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 TRIM7Q9C029 511 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 MMRN2Q9H8L6 949 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SH3GLB2Q9NR46 395 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 MAPK8IP1Q9UQF2 711 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 DIS3Q9Y2L1 958 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 CHD4Q14839 1912 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 RASSF10A6NK89 507 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 BHMG1C9JSJ3 638 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 PGRMC1O00264 195 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 RAD51CO43502 376 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 KLRC4O43908 158 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 NQO1P15559 274 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 IBSPP21815 317 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 MCAMP43121 646 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 MAGOHP61326 146 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 MRPS35P82673 323 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 RASSF7Q02833 373 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 LRRC63Q05C16 580 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SCARF1Q14162 830 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PKN1Q16512 942 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ASTE1Q2TB18 679 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 TDRD12Q587J7 1177 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 MIIPQ5JXC2 388 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SFMBT2Q5VUG0 894 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SLC30A9Q6PML9 568 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 RRAGAQ7L523 313 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 DZIP3Q86Y13 1208 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 STAG2Q8N3U4 1231 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SCFD2Q8WU76 684 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 MAGOHBQ96A72 148 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 STAMBPL1Q96FJ0 436 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PGM2Q96G03 612 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 MTRQ99707 1265 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 C7orf25Q9BPX7 421 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 KIF9Q9HAQ2 790 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 INCENPQ9NQS7 918 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 TCP11L1Q9NUJ3 509 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.47□□□□□ -1.53
LMO3-229ENST00000543721 CEP72Q9P209 647 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SIK3Q9Y2K2 1263 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 UTP11Q9Y3A2 253 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 V9GY48 417 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 TCRBV5S4A2TA0A5A2 114 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 LRRD1A4D1F6 860 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 O00370 1275 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ATP2C2O75185 946 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PALMO75781 387 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 GCP02774 474 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 PCCAP05165 728 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 CSF1RP07333 972 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms