RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 ICAM3P32942 547 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 SMAD3P84022 425 aaKnown RBP21.42■■□□□ 1.02
TMED3-204ENST00000543455 PTPN11Q06124 597 aaPredicted RBP21.42■■□□□ 1.02
TMED3-204ENST00000543455 APOBRQ0VD83 1088 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 DGKDQ16760 1214 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 KCNV1Q6PIU1 500 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 SYNE3Q6ZMZ3 975 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 SCLYQ96I15 445 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 PSTPIP2Q9H939 334 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 RTEL1Q9NZ71 1219 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 TELO2Q9Y4R8 837 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 HAS3O00219 553 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 F2P00734 622 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 SUPT20HL2P0C7V6 817 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
TMED3-204ENST00000543455 PCNX4Q63HM2 1172 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 GDF6Q6KF10 455 aaPredicted RBP21.41■■□□□ 1.02
TMED3-204ENST00000543455 Q6ZUG5 572 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 HEATR3Q7Z4Q2 680 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 SESTD1Q86VW0 696 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 CUL5Q93034 780 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 AGXT2Q9BYV1 514 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 TET1Q8NFU7 2136 aa21.41■■□□□ 1.02
TMED3-204ENST00000543455 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 STAM2O75886 525 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 REC8O95072 547 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 RCAN1P53805 252 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 CHMP4BP1P59074 171 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 BRF1Q92994 677 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 SPATA33Q96N06 139 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 GUCD1Q96NT3 240 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 NID2Q14112 1375 aa21.4■■□□□ 1.02
TMED3-204ENST00000543455 ADD1P35611 737 aaKnown RBP21.39■■□□□ 1.02
TMED3-204ENST00000543455 PSEN2P49810 448 aa21.39■■□□□ 1.02
TMED3-204ENST00000543455 HIC1Q14526 733 aa21.39■■□□□ 1.02
TMED3-204ENST00000543455 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.02
TMED3-204ENST00000543455 FBXL16Q8N461 479 aa21.39■■□□□ 1.02
TMED3-204ENST00000543455 DHX38Q92620 1227 aaKnown RBP21.39■■□□□ 1.02
TMED3-204ENST00000543455 TTYH1Q9H313 450 aaPredicted RBP21.39■■□□□ 1.02
TMED3-204ENST00000543455 CXXC1Q9P0U4 656 aaPredicted RBP21.39■■□□□ 1.02
TMED3-204ENST00000543455 V9GY48 417 aaPredicted RBP21.39■■□□□ 1.02
TMED3-204ENST00000543455 RBAK-RBAKDNI3L0D1 243 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 PSRC1Q6PGN9 363 aaPredicted RBP21.39■■□□□ 1.01
TMED3-204ENST00000543455 HERVK_113Q902F9 699 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 FAM161BQ96MY7 647 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 C16orf70Q9BSU1 422 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 USP26Q9BXU7 913 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 HDAC6Q9UBN7 1215 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 GTF2IRD1Q9UHL9 959 aa21.39■■□□□ 1.01
TMED3-204ENST00000543455 GBF1Q92538 1859 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 STXBP3O00186 592 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 FIBPO43427 364 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 PPFIA4O75335 1185 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 MFSD10Q14728 455 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 GNPTABQ3T906 1256 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 XRRA1Q6P2D8 792 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 ALG1Q9BT22 464 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 PCDHA6Q9UN73 950 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 PCDHA8Q9Y5H6 950 aa21.38■■□□□ 1.01
TMED3-204ENST00000543455 GRXCR1A8MXD5 290 aa21.37■■□□□ 1.01
TMED3-204ENST00000543455 EPB41L2O43491 1005 aaKnown RBP21.37■■□□□ 1.01
TMED3-204ENST00000543455 ITGB5P18084 799 aa21.37■■□□□ 1.01
TMED3-204ENST00000543455 PTGISQ16647 500 aa21.37■■□□□ 1.01
TMED3-204ENST00000543455 KIAA0753Q2KHM9 967 aa21.37■■□□□ 1.01
TMED3-204ENST00000543455 MLXIPQ9HAP2 919 aa21.37■■□□□ 1.01
TMED3-204ENST00000543455 METAP2P50579 478 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMED3-204ENST00000543455 METTL7BQ6UX53 244 aa21.36■■□□□ 1.01
TMED3-204ENST00000543455 CYFIP1Q7L576 1253 aa21.36■■□□□ 1.01
TMED3-204ENST00000543455 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
TMED3-204ENST00000543455 RIC8AQ9NPQ8 531 aa21.36■■□□□ 1.01
TMED3-204ENST00000543455 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
TMED3-204ENST00000543455 UBIAD1Q9Y5Z9 338 aa21.36■■□□□ 1.01
TMED3-204ENST00000543455 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.35■■□□□ 1.01
TMED3-204ENST00000543455 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.35■■□□□ 1.01
TMED3-204ENST00000543455 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 ADAMTS3O15072 1205 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 ATP9AO75110 1047 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 FGBP02675 491 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 NAPAP54920 295 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 ZNF200P98182 395 aaPredicted RBP21.35■■□□□ 1.01
TMED3-204ENST00000543455 TOB2Q14106 344 aaPredicted RBP21.35■■□□□ 1.01
TMED3-204ENST00000543455 GPNMBQ14956 572 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 ZNF697Q5TEC3 545 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 PPP1R18Q6NYC8 613 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 OTOP2Q7RTS6 562 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 WNT8BQ93098 351 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 GPR20Q99678 358 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 KATNAL1Q9BW62 490 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 BARHL2Q9NY43 387 aa21.35■■□□□ 1.01
TMED3-204ENST00000543455 LGALS2P05162 132 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 IQCF3P0C7M6 154 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 KCNA2P16389 499 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 PBX2P40425 430 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 EVCP57679 992 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 FGD1P98174 961 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 NEDD9Q14511 834 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms