RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MKI67P46013 3256 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 SPATA31C2B4DYI2 1134 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 NOP56O00567 594 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 B4GALT4O60513 344 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 GGPS1O95749 300 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 RFC2P35250 354 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 ADCY7P51828 1080 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 EVCP57679 992 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 ANAPC15P60006 121 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 PSMC6P62333 389 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 TMEM63BQ5T3F8 832 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 CMTR1Q8N1G2 835 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 C7orf31Q8N865 590 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 BARHL2Q9NY43 387 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
NPIPB4-217ENST00000543449 TRIOBPQ9H2D6 2365 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 TMEM265A0A087WTH1 108 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 RGS20O76081 388 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 F2P00734 622 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 SCG2P13521 617 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 UBA1P22314 1058 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 GNA11P29992 359 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 FUT2Q10981 343 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 SHHQ15465 462 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 IL31RAQ8NI17 732 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 BICD2Q8TD16 824 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PPP1R12CQ9BZL4 782 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 IL23AQ9NPF7 189 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
NPIPB4-217ENST00000543449 BAZ2BQ9UIF8 2168 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 GNAT1P11488 350 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 ITGB8P26012 769 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 PSEN2P49810 448 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 MFSD10Q14728 455 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 PTGISQ16647 500 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 TRPV6Q9H1D0 765 aa11.77□□□□□ -0.53
NPIPB4-217ENST00000543449 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 STXBP3O00186 592 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 HAS3O00219 553 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 CPLX1O14810 134 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 CDKL5O76039 1030 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 FGBP02675 491 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 ACTN1P12814 892 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 CSF2RAP15509 400 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 IFNAR1P17181 557 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 PTGS1P23219 599 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 CDC27P30260 824 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 CYP2C18P33260 490 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 MTMR1Q13613 665 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 KIAA0753Q2KHM9 967 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 HSDL1Q3SXM5 330 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 C9orf50Q5SZB4 431 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 KAT2BQ92831 832 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 LRCH3Q96II8 777 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 JADE2Q9NQC1 790 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 SH3GLB2Q9NR46 395 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms