RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 DDX12PQ92771 950 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
PTCD2-212ENST00000543322 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 EHD2Q9NZN4 543 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 RNF14Q9UBS8 474 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 ARFGEF1Q9Y6D6 1849 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 MYH7BA7E2Y1 1941 aa14.3□□□□□ -0.12
PTCD2-212ENST00000543322 OPA1O60313 960 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 PDHBP11177 359 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 CXCR5P32302 372 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 SEPT2Q15019 361 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
PTCD2-212ENST00000543322 KRT79Q5XKE5 535 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 C8orf74Q6P047 294 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 MYOCDQ8IZQ8 938 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 TSEN2Q8NCE0 465 aaKnown RBP14.29□□□□□ -0.12
PTCD2-212ENST00000543322 GLIS3Q8NEA6 775 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 RBM12Q9NTZ6 932 aaKnown RBP14.29□□□□□ -0.12
PTCD2-212ENST00000543322 COL4A3BPQ9Y5P4 624 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 C10orf71Q711Q0 1435 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 BTAF1O14981 1849 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 ZPR1O75312 459 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 NOL4O94818 638 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 PLCG2P16885 1265 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 IRAK1P51617 712 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 SLC7A5Q01650 507 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 RASSF7Q02833 373 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 COASYQ13057 564 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 PPP1R18Q6NYC8 613 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 CACNA2D4Q7Z3S7 1137 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 DNAJC19Q96DA6 116 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
PTCD2-212ENST00000543322 TLR2O60603 784 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 SERPING1P05155 500 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 SKOR1P84550 965 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 PSMB7Q99436 277 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
PTCD2-212ENST00000543322 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTCD2-212ENST00000543322 CPP00450 1065 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 SNHG28P0DPA3 235 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTCD2-212ENST00000543322 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.12
PTCD2-212ENST00000543322 RHBDL3P58872 404 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 FKBP3Q00688 224 aaKnown RBP14.27□□□□□ -0.12
PTCD2-212ENST00000543322 NFIXQ14938 502 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 LRRC41Q15345 812 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 CFAP221Q4G0U5 840 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 TTMPQ5BVD1 217 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 HYIQ5T013 277 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 GPIHBP1Q8IV16 184 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 ANKRD13CQ8N6S4 541 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 PPM1EQ8WY54 764 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 COA7Q96BR5 231 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 HINFPQ9BQA5 517 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 EFCC1Q9HA90 598 aa14.27□□□□□ -0.12
PTCD2-212ENST00000543322 GAKO14976 1311 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 FRMPD2Q68DX3 1309 aaPredicted RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 BUB1O43683 1085 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 HSF2BPO75031 334 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 MRPS25P82663 173 aaKnown RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 NAB2Q15742 525 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 ECM1Q16610 540 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 ZC3H3Q8IXZ2 948 aaKnown RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.13
PTCD2-212ENST00000543322 TANGO6Q9C0B7 1094 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 FAM107BQ9H098 131 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 ATP6V0A2Q9Y487 856 aa14.27□□□□□ -0.13
PTCD2-212ENST00000543322 GNPATO15228 680 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 GNA14O95837 355 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 CLK2P49760 499 aaKnown RBP14.26□□□□□ -0.13
PTCD2-212ENST00000543322 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 TRIM59Q8IWR1 403 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 MREGQ8N565 214 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-212ENST00000543322 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 LUC7LQ9NQ29 371 aaKnown RBP14.26□□□□□ -0.13
PTCD2-212ENST00000543322 PCDHGC5Q9Y5F6 944 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 KDM3AQ9Y4C1 1321 aa14.26□□□□□ -0.13
PTCD2-212ENST00000543322 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
PTCD2-212ENST00000543322 VGLL3A8MV65 326 aa14.25□□□□□ -0.13
PTCD2-212ENST00000543322 IL1R1P14778 569 aa14.25□□□□□ -0.13
PTCD2-212ENST00000543322 NOP2P46087 812 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms