RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 PPP2R2DQ66LE6 453 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 CMTR1Q8N1G2 835 aaKnown RBP13.95□□□□□ -0.18
PTPN6-220ENST00000543115 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 WNT8BQ93098 351 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 SPATA33Q96N06 139 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 MAP3K14Q99558 947 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 FTOQ9C0B1 505 aaKnown RBP eCLIP13.95□□□□□ -0.18
PTPN6-220ENST00000543115 PCDHA11Q9Y5I1 949 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 GBF1Q92538 1859 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 ARHGEF15O94989 841 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 CKBP12277 381 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 ACTN1P12814 892 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 RBL2Q08999 1139 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 TCTN1Q2MV58 587 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 CREB3L3Q68CJ9 461 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 KCNV1Q6PIU1 500 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 USP17L6PQ6QN14 398 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 SRBD1Q8N5C6 995 aaKnown RBP13.94□□□□□ -0.18
PTPN6-220ENST00000543115 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 CTCFLQ8NI51 663 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-220ENST00000543115 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 MTA3Q9BTC8 594 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 KATNAL1Q9BW62 490 aa13.94□□□□□ -0.18
PTPN6-220ENST00000543115 MEIS2O14770 477 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 NBNO60934 754 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 PPFIA4O75335 1185 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 CA3P07451 260 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 TGFB3P10600 412 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 SELPP16109 830 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 IGFBP4P22692 258 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 KIF5BP33176 963 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 MCM5P33992 734 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
PTPN6-220ENST00000543115 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 RRP36Q96EU6 259 aaKnown RBP13.93□□□□□ -0.18
PTPN6-220ENST00000543115 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 INPP4AQ96PE3 977 aaPredicted RBP13.93□□□□□ -0.18
PTPN6-220ENST00000543115 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 LRRC2Q9BYS8 371 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 RTEL1Q9NZ71 1219 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 TELO2Q9Y4R8 837 aa13.93□□□□□ -0.18
PTPN6-220ENST00000543115 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 RFXAPO00287 272 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 ICAM3P32942 547 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 PTK7Q13308 1070 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-220ENST00000543115 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 TMCO2Q7Z6W1 182 aaPredicted RBP13.92□□□□□ -0.18
PTPN6-220ENST00000543115 HERC6Q8IVU3 1022 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 PHOSPHO2Q8TCD6 241 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 MLXIPQ9HAP2 919 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 CHD9Q3L8U1 2897 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
PTPN6-220ENST00000543115 MYO9BQ13459 2157 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 hCG_1642624A0A1W2PR95 340 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 EPOPA6NHQ4 379 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 CXCL10P02778 98 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 LGALS2P05162 132 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 LIFRP42702 1097 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 WDR5P61964 334 aaKnown RBP13.91□□□□□ -0.18
PTPN6-220ENST00000543115 DEFB103AP81534 67 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 MBTPS1Q14703 1052 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 BMP2KLQ5H9B9 411 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 SPRED2Q7Z698 418 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 TMTC2Q8N394 836 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 LZTS2Q9BRK4 669 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
PTPN6-220ENST00000543115 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
PTPN6-220ENST00000543115 H3BRB1 525 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 FIBPO43427 364 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 STAM2O75886 525 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 GNAQP50148 359 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 TAP1Q03518 808 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 PCNX4Q63HM2 1172 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 CNKSR3Q6P9H4 555 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 GPR20Q99678 358 aa13.9□□□□□ -0.18
PTPN6-220ENST00000543115 TUT1Q9H6E5 874 aaKnown RBP13.9□□□□□ -0.18
PTPN6-220ENST00000543115 VCANP13611 3396 aa13.89□□□□□ -0.19
PTPN6-220ENST00000543115 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
PTPN6-220ENST00000543115 LCHNA4D1U4 455 aa13.89□□□□□ -0.19
PTPN6-220ENST00000543115 SMIM10L2AP0DMW4 78 aa13.89□□□□□ -0.19
PTPN6-220ENST00000543115 SMIM10L2BP0DMW5 78 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms