RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 OSBP2Q969R2 916 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 SDCCAG3Q96C92 435 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 TTLL1O95922 423 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 MSH2P43246 934 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 LRRC63Q05C16 580 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 LRGUKQ96M69 825 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 STMN1P16949 149 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 FAM98CQ17RN3 349 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 MUM1L1Q5H9M0 696 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 CACYBPQ9HB71 228 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 MRPL47Q9HD33 250 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 IPO11Q9UI26 975 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 NT5C2P49902 561 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 TAB3Q8N5C8 712 aaPredicted RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 NACC1Q96RE7 527 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 CCDC68Q9H2F9 335 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 NDST4Q9H3R1 872 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 PCDHB6Q9Y5E3 794 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 TTC4O95801 387 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 HSPA2P54652 639 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 ZKSCAN8Q15776 578 aaPredicted RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 GLE1Q53GS7 698 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 FAM160B1Q5W0V3 765 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 JADE1Q6IE81 842 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 PTCH1Q13635 1447 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 RASGRF2O14827 1237 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 ABCD1P33897 745 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 RPAINQ86UA6 219 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 GCNT4Q9P109 453 aa14.22□□□□□ -0.13
TNC-212ENST00000542877 FAF1Q9UNN5 650 aaPredicted RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 NOVA2Q9UNW9 492 aaKnown RBP14.22□□□□□ -0.13
TNC-212ENST00000542877 PEX19P40855 299 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 PRPSAP1Q14558 356 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 TMED2Q15363 201 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 DCAF15Q66K64 600 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 PRPF31Q8WWY3 499 aaKnown RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 SUGCTQ9HAC7 445 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ANKFY1Q9P2R3 1169 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 BAG5Q9UL15 447 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 TPX2Q9ULW0 747 aaKnown RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 IL6STP40189 918 aaPredicted RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 SCNN1DP51172 638 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 KRT31Q15323 416 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ANKRD20A4Q4UJ75 823 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ANKRD20A8PQ5CZ79 823 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ANKRD20A2Q5SQ80 823 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ANKRD20A1Q5TYW2 823 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 FMO2Q99518 471 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ZNF577Q9BSK1 485 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ZSWIM5Q9P217 1185 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 XDHP47989 1333 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 WDR46O15213 610 aaKnown RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 SMIM24O75264 130 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 GFPT2O94808 682 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 RPSAP08865 295 aaKnown RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 ATP1A3P13637 1013 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 ECE1P42892 770 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 KMT5BQ4FZB7 885 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 RESP18Q5W5W9 173 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 FBXO41Q8TF61 875 aa14.21□□□□□ -0.13
TNC-212ENST00000542877 SPATS2LQ9NUQ6 558 aaKnown RBP14.21□□□□□ -0.13
TNC-212ENST00000542877 TMOD1P28289 359 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 PTPN12Q05209 780 aaKnown RBP14.21□□□□□ -0.14
TNC-212ENST00000542877 TFDP1Q14186 410 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 RCN2Q14257 317 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 E2F5Q15329 346 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 SLFNL1Q499Z3 407 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 C6orf118Q5T5N4 469 aa14.21□□□□□ -0.14
TNC-212ENST00000542877 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.14
TNC-212ENST00000542877 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.14
TNC-212ENST00000542877 CCDC188H7C350 402 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 CYP4F22Q6NT55 531 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.2□□□□□ -0.14
TNC-212ENST00000542877 DISC1Q9NRI5 854 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 DR1Q01658 176 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 SNX1Q13596 522 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 TERF2Q15554 542 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 CDC37Q16543 378 aaPredicted RBP14.2□□□□□ -0.14
TNC-212ENST00000542877 EPS15L1Q9UBC2 864 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 GOLGA8CPA6NN73 597 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 PLCG1P19174 1290 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 ADCY2Q08462 1091 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 PRKG1Q13976 671 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 LCORLQ8N3X6 602 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 ZMYND12Q9H0C1 365 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 PLEKHG1Q9ULL1 1385 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 MCF2LO15068 1137 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 PIGSQ96S52 555 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms