RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 POMGNT1Q8WZA1 660 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 TIGD1Q96MW7 591 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 SOWAHDA6NJG2 315 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 CALUO43852 315 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 CD19P15391 556 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 STK4Q13043 487 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 CTAGE9A4FU28 777 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 ADM5C9JUS6 153 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 KRT31Q15323 416 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 ARL6IP4Q66PJ3 421 aaKnown RBP11.19□□□□□ -0.62
TOP3A-208ENST00000542570 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 TAX1BP1Q86VP1 789 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 OR8K1Q8NGG5 319 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 CCDC113Q9H0I3 377 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 FAM49AQ9H0Q0 323 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-208ENST00000542570 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
TOP3A-208ENST00000542570 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 GCFC2P16383 781 aaKnown RBP11.19□□□□□ -0.62
TOP3A-208ENST00000542570 CAP2P40123 477 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 PTPAQ15257 358 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 NLRP4Q96MN2 994 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 TRIM6Q9C030 488 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-208ENST00000542570 SH3GLB2Q9NR46 395 aa11.19□□□□□ -0.62
TOP3A-208ENST00000542570 NFIBO00712 420 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 TACC1O75410 805 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 LIG4P49917 911 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 MRPS25P82663 173 aaKnown RBP11.18□□□□□ -0.62
TOP3A-208ENST00000542570 OTUD6AQ7L8S5 288 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-208ENST00000542570 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 MRFAP1L1Q96HT8 127 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 AK8Q96MA6 479 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 ERICH4A6NGS2 130 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 ARHGAP6O43182 974 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 TNFAIP3P21580 790 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 CTNNA2P26232 953 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 NMT1P30419 496 aaKnown RBP11.18□□□□□ -0.62
TOP3A-208ENST00000542570 NPEPPSP55786 919 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 RPS6P62753 249 aaKnown RBP11.18□□□□□ -0.62
TOP3A-208ENST00000542570 KRT83P78385 493 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 RIC8AQ9NPQ8 531 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 FEM1BQ9UK73 627 aa11.18□□□□□ -0.62
TOP3A-208ENST00000542570 SLC16A4O15374 487 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 EGFRP00533 1210 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 CEP55Q53EZ4 464 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 U2AF1L4Q8WU68 220 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 IFT81Q8WYA0 676 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 NACC1Q96RE7 527 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 LAD1O00515 517 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 LMNB1P20700 586 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 DHX40Q8IX18 779 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 ENOX1Q8TC92 643 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 COG2Q14746 738 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 PLA2G4FQ68DD2 849 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 SLC7A3Q8WY07 619 aa11.17□□□□□ -0.62
TOP3A-208ENST00000542570 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
TOP3A-208ENST00000542570 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CTAGE15A4D2H0 777 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 PGK2P07205 417 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CTAGE8P0CG41 777 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CCNE1P24864 410 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 DNM2P50570 870 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 TRPC3Q13507 836 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ASIC2Q16515 512 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CTAGE6Q86UF2 777 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CTAGE4Q8IX94 777 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms